Spiroplasma mirum ATCC 29335: SMM_0914
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Entry
SMM_0914 CDS
T03003
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
smir
Spiroplasma mirum ATCC 29335
Brite
KEGG Orthology (KO) [BR:
smir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smir03032
]
SMM_0914 (hupA)
03036 Chromosome and associated proteins [BR:
smir03036
]
SMM_0914 (hupA)
03400 DNA repair and recombination proteins [BR:
smir03400
]
SMM_0914 (hupA)
DNA replication proteins [BR:
smir03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SMM_0914 (hupA)
Chromosome and associated proteins [BR:
smir03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SMM_0914 (hupA)
DNA repair and recombination proteins [BR:
smir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SMM_0914 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AHF61302
UniProt:
W0GM89
LinkDB
All DBs
Position
complement(855191..855463)
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AA seq
90 aa
AA seq
DB search
MSKKELAELLAGEFNTSKADGERMVNFIFEKISNTLTKGQEVSIAGFGKFSISERAARDG
RNPATGQTIKIPASKAAKFKAAKQLKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaagaattagcagaattactagctggagaatttaatacatcaaaagccgat
ggtgaaagaatggttaattttatttttgaaaaaatttcaaatactttaactaaaggacaa
gaagtatcaattgccggatttggaaagttttcaatttctgaaagagcagctagagatgga
agaaacccagcaactggacaaactatcaaaattcctgcatctaaagcagctaaatttaaa
gcagctaaacaattaaaagatgcattaaactaa
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