Spiroplasma mirum ATCC 29335: SMM_0993
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Entry
SMM_0993 CDS
T03003
Symbol
rnhB
Name
(GenBank) putative ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
smir
Spiroplasma mirum ATCC 29335
Pathway
smir03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMM_0993 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smir03032
]
SMM_0993 (rnhB)
Enzymes [BR:
smir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SMM_0993 (rnhB)
DNA replication proteins [BR:
smir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SMM_0993 (rnhB)
Elongation factors (archaeal)
SMM_0993 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
AHF61369
UniProt:
W0GRV2
LinkDB
All DBs
Position
complement(929243..929848)
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AA seq
201 aa
AA seq
DB search
MNQFEQDLLKQYPQVKIFSGSDEAGRGCLAGPLVVATVVLPLDYFNPAIKDSKKLTALQR
EQLFTEITKVALDYAIYTVSVEQVEEMNPKQASIFGMEQTIQMLKVKPDLNLTDAEKLSV
HFNYQNIIDGDNLSQSIGAASILAKVTRDLMMIDYHKRYPVYNFKNNKGYGTKEHLMALQ
KYGLCPLHRKTYAPIKKLLKK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtttgaacaagatttattaaaacaatatccccaagttaaaatcttttctggt
agtgatgaagcagggcggggatgtttagccggaccattggttgttgcaaccgttgtctta
ccactggattattttaatccagcgattaaagatagtaaaaaattaacagcactccaacga
gaacaattatttactgaaattactaaagttgcccttgattatgcaatttacacggtttcg
gttgaacaagttgaagaaatgaatcctaaacaggcaagtatttttgggatggaacaaaca
attcaaatgcttaaagtaaaacctgacctaaatttaactgacgcggaaaaattatcagtc
cattttaattatcaaaatattattgatggtgataatttatcccaatcaattggggccgct
tcgatccttgctaaagtaacaagggatttaatgatgattgattatcataaacgctatccg
gtttataatttcaaaaataataaaggttatggaacaaaagaacatttaatggctttgcaa
aagtatgggttgtgtccgttacaccgaaaaacttatgccccaatcaaaaaacttcttaaa
aaataa
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