Salegentibacter mishustinae: LDL76_00035
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Entry
LDL76_00035 CDS
T07820
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis00300
Lysine biosynthesis
smis00470
D-Amino acid metabolism
smis01100
Metabolic pathways
smis01110
Biosynthesis of secondary metabolites
smis01120
Microbial metabolism in diverse environments
smis01230
Biosynthesis of amino acids
Module
smis_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LDL76_00035 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDL76_00035 (dapF)
Enzymes [BR:
smis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LDL76_00035 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UBZ07125
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All DBs
Position
complement(5079..5867)
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AA seq
262 aa
AA seq
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MKIPFYKYQGTGNDFVMIDNRQRLISKNNTKLIKKLCDRKFGIGGDGLILLENPEVDGDD
FKMVYFNADGNESSMCGNGGRCLVAFAKFLGIIENEATFTAIDGPHKATISDHEVSLQMQ
NLSEIKQLGNSAFLDTGSPHHVVFTKNVTDLDVKKEGAVIRYSDEYLSTGGTNVNFVDMQ
EENTFLVRTYERGVEDETLSCGTGVTAVALAAHASGKANGNTVKLIVPGGELSVSFRKEN
EIYTDVWLTGPAEQVFKGEIVC
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattccattttataaatatcaagggacgggaaatgatttcgtgatgattgataac
cgtcaacgattaatatccaaaaacaataccaaattaattaagaagctttgtgaccgtaaa
tttggcattggtggagacggattaatccttttagagaatccggaggtagatggagatgat
tttaaaatggtctattttaatgccgatggtaacgaaagtagtatgtgtggcaatggcggc
cggtgtttggtagcttttgctaagttcctgggaattatagaaaatgaagcaacatttact
gcaatagatgggccgcataaagcgacaattagtgatcacgaggtaagcttgcaaatgcaa
aatctttcagaaataaagcaactgggcaacagtgcttttctcgataccggctctccacat
cacgtggtttttacaaaaaatgttactgatcttgatgtgaaaaaagaaggcgctgtaatt
aggtattcagatgagtatcttagcacgggcggtaccaatgtgaattttgtagatatgcag
gaagagaatacctttctggttagaacctatgaaaggggagtggaagacgaaacactttcc
tgtggtaccggcgttacagccgtagctttggccgcacacgcctcggggaaagcgaatgga
aataccgtaaaacttattgttcccggtggggaattgtcggtttcttttagaaaggaaaat
gaaatctataccgatgtttggttaaccggcccggcagagcaggtttttaagggtgaaata
gtatgctaa
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