Salegentibacter mishustinae: LDL76_00580
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Entry
LDL76_00580 CDS
T07820
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis00300
Lysine biosynthesis
smis00470
D-Amino acid metabolism
smis01100
Metabolic pathways
smis01110
Biosynthesis of secondary metabolites
smis01120
Microbial metabolism in diverse environments
smis01230
Biosynthesis of amino acids
Module
smis_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LDL76_00580
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LDL76_00580
Enzymes [BR:
smis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LDL76_00580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
UBZ07222
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All DBs
Position
complement(115275..116735)
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AA seq
486 aa
AA seq
DB search
MKNNTKYFKGNPEGGLTPITSPWMHQLFENQKLLSELFRKFSSPINIHHLPTFASTISSY
KEVFESYDLKYQIFYARKANKSKSLVKQAFGSGIGVDTASLRELEQSIALGGKGDNLVLT
AAIKTKEQYSLAIQNEIPIILDNFEELEQANNIAKQLNKKAIIGIRVSGFIVEESKLYSR
FGFDIEKVEQFISKKLDLGSPYQNLKLKGLHFHLDGYSTQQRGKALSDCLNLIRSLNAKA
FDISFIDIGGGILMNYLESEQEWTDFETKLKNAVQNDRNQLTFNNDGLGYEMVDGKLRGS
LKTYPYFNKVNGTTFIKEVLDYSNLQTGKTNAQELKELQLELRIEPGRSLLSLTGITLAK
VAHRKQDAKGQWLVGLEMNMTQMMSSSKDFLLDPFIIYKDSQESNTSVDVFFTGAYCLER
DVLLKRKISLPTLPKIGDFVAFVNTAGYMMHFFETEAHLFDLSTNLFLNSQGDFTLTDFI
DDNAIK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacacaaagtactttaaaggaaatcctgaaggcgggttaaccccaattact
tcgccctggatgcatcaattatttgagaaccagaaattgctaagtgagttattcagaaaa
ttttcctcacctattaatattcatcatctaccaacatttgccagtacgatttcttcttat
aaagaagtttttgaatcgtatgatctaaaatatcagattttttatgctagaaaggccaac
aaatcaaaatccttagtaaagcaggcttttgggtcgggaattggcgtagatactgcaagc
ctaagagaactagaacaaagtatcgctttgggcggaaagggcgataacttagtattaacg
gctgcaataaaaaccaaagaacaatatagtcttgctatccaaaacgaaataccgataata
ctggataatttcgaggaattggaacaagccaataatattgccaagcagctaaataaaaaa
gcaattataggaattcgcgtaagtggttttatagtagaagaaagtaagctttatagccgt
tttggttttgatattgaaaaagtggaacagtttatctcaaaaaaattggatttgggctca
ccttatcaaaatttaaaattaaagggtctgcactttcatttagatggttactcaacgcag
caaaggggtaaagctttgtctgattgcttaaaccttattaggtcattgaatgcgaaagct
tttgatatttcttttatagatataggaggtggaattctaatgaattatttggaaagtgaa
caggagtggacagatttcgaaacaaaactgaagaatgctgttcagaatgatcggaatcag
cttacttttaataatgatggtttgggatatgagatggttgatggaaaattacgtggcagt
ttaaagacatatccctatttcaataaagtaaatggtacgaccttcataaaggaagtcctt
gattattccaatttgcagacaggaaaaacaaatgctcaagagttaaaagaattacaatta
gaactgcgtatagaaccgggtcgatctctgctaagcctaacaggaataacccttgccaag
gttgcacataggaaacaggatgctaaagggcaatggctagtgggacttgaaatgaacatg
acacaaatgatgagttcaagcaaagactttttactagacccctttattatatataaagat
tcccaagagtctaacacttccgtagatgttttctttaccggggcttactgtttagaaaga
gatgtgcttcttaagagaaaaataagtttgccaactttgccaaaaattggagattttgta
gcctttgtaaataccgccggttatatgatgcatttttttgaaactgaggcgcatttgttt
gatttatctacaaacctatttttaaatagtcagggagattttacacttacagacttcatc
gatgataatgcgataaaatga
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