Salegentibacter mishustinae: LDL76_01665
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Entry
LDL76_01665 CDS
T07820
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL76_01665 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smis03019
]
LDL76_01665 (recQ)
03400 DNA repair and recombination proteins [BR:
smis03400
]
LDL76_01665 (recQ)
Enzymes [BR:
smis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDL76_01665 (recQ)
Messenger RNA biogenesis [BR:
smis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LDL76_01665 (recQ)
DNA repair and recombination proteins [BR:
smis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LDL76_01665 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
UBZ07425
LinkDB
All DBs
Position
complement(364092..366290)
Genome browser
AA seq
732 aa
AA seq
DB search
MSLTEIDLHQQLKKYFGFSQFKGLQEEVITSIVKGNNSFVVMPTGGGKSLCYQLPALIEE
GTAIVVSPLIALMKNQVDAIRSISEEHGVAHVLNSSLNKTEVRQVKADIESGVCKLLYVA
PESLTKEDHVEFLKQQKISFLAIDEAHCISEWGHDFRPEYRNLRSIIKRIGDNIPIIALT
ATATPKVQEDILKNLGIPDANTFKASFNRPNLYYEVRPKTKNVDADIIRFIKQNSGKSGI
IYCLSRKKVEELAQTLQVNGINAVPYHAGLDAKKRSKHQDQFLMEEIDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQ
EIGHALLQEVVAYAETSISRRKFILHYFGEEFDGETGEGASMDDNVRNPKKQHEAGDEVE
LLLKTVKETKQLYKSKEVVKTLIGKSNAVILSHKTDTHPLFGKGKDRDGKYWMALIRQVL
VAGYLKKDIETYGVIKLTAKGEDFLKNPTSFMMTDDHIFDSTTEAVSTASQSSGGGVDKT
LVKMLKDLRKKVAVKNEVPPFVVFQDPSLEDMAIKYPVNIEELTNIFGVGENKAKKFGKE
FLDLIQRYVDENEIVRPDDLVVKSTGANSALKLYIIQNVDRKLPLDDIASAKGMEMKEFI
KEMEAIVYSGTKLNINYWIDDILDEDQQEEIHEYFLEADTDKIDEAIKEFDGDYDDEELR
LYRIKFISEVAN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgacggaaattgatttacaccaacagctaaagaagtactttgggtttagccaa
ttcaaaggacttcaggaagaggtgattaccagtattgtaaaaggaaataattcttttgtg
gtaatgcctaccggaggagggaaatccctatgttaccaactccctgcgttgattgaagaa
ggaacggcaattgtggtttcgcccctaatagctttaatgaagaaccaggtagatgctata
cgtagtatttctgaagagcatggcgtagcccatgtgctaaattcttcccttaacaaaacc
gaggttagacaggttaaagcagacatagaaagtggcgtttgtaaactgctttatgtagct
cccgaatcgcttaccaaagaagatcatgttgaatttctaaaacagcaaaagatatctttt
ctagctatagacgaggcgcattgtattagtgagtggggacacgattttagacccgaatac
cggaatttgcgaagcattataaagcgaataggagataatattccaattattgcgcttact
gcaacggcaacacccaaagtgcaggaagatattttaaagaatttgggaattcccgatgca
aatacctttaaggccagttttaaccggcctaatttatactacgaggtgcggcccaaaact
aaaaatgttgatgccgatattattcgttttattaaacagaatagtgggaaatctggaatt
atctattgtttaagtagaaaaaaggttgaagaacttgcccagactttacaagtaaacgga
attaacgccgtgccttatcatgccgggttagacgcaaagaaacgaagtaaacatcaggat
caatttcttatggaagaaattgatgtggttgtggctaccatagcctttgggatgggaata
gacaaaccagatgttcggtttgtaattcaccacgatattccaaaaagtatagaaagttat
taccaggaaacgggccgtgcaggtagagacggcggggaagggcattgtcttgccttttat
tcttataaagatatagaaaagctcgaaaaatttatgagcggaaaacctgttgccgagcag
gaaataggtcacgcccttttgcaggaagtagtggcttatgcagaaacttcaatttcccgt
agaaaatttattctacattattttggagaggaatttgacggggaaaccggtgaaggcgcg
tctatggacgataatgttagaaatcctaaaaaacaacacgaagcaggagacgaggtagaa
ttgctgttgaaaacagttaaggaaaccaagcagctttataagtctaaagaagtggtgaaa
acgcttataggaaaatctaacgcggttattttatcacataaaaccgatacgcatccttta
ttcggaaaagggaaagaccgggatggaaaatattggatggctttaatcaggcaggtgctg
gttgcaggatatttaaagaaagatattgaaacctatggcgtgataaaacttaccgctaaa
ggagaagattttttaaagaatcctacatcttttatgatgaccgacgaccatatttttgac
agtactacagaagctgtttctactgcaagccaatctagtggtggcggggtagataaaacg
ctggtaaaaatgttaaaggatcttagaaaaaaagttgctgtaaaaaatgaggttccacca
tttgtggtatttcaggatccttcgctcgaagatatggcgattaaatacccggtgaatatt
gaagaactcactaatatttttggggtaggagagaacaaagccaaaaaattcggtaaagaa
tttttggatctaattcagcgctatgttgatgaaaatgagattgtacggccagatgatctg
gtggtgaaatctaccggcgccaattcggctttaaaattatatattatccagaatgtagat
agaaaactacctttagatgatatcgcttctgccaagggcatggagatgaaagaatttata
aaggaaatggaagccattgtttacagcggaaccaagctgaatataaattactggatagac
gatatattagacgaagaccagcaggaagaaattcacgaatattttttggaagctgatacc
gataaaattgatgaagctattaaagaatttgatggtgattatgacgatgaagaacttcgg
ttatatcgcattaaatttattagcgaagtagcgaattaa
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