Salegentibacter mishustinae: LDL76_02440
Help
Entry
LDL76_02440 CDS
T07820
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDL76_02440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smis03021
]
LDL76_02440
03400 DNA repair and recombination proteins [BR:
smis03400
]
LDL76_02440
Enzymes [BR:
smis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDL76_02440
Transcription machinery [BR:
smis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LDL76_02440
DNA repair and recombination proteins [BR:
smis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LDL76_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Peptidase_S80
Motif
Other DBs
NCBI-ProteinID:
UBZ07575
LinkDB
All DBs
Position
complement(532205..533197)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGYAITSIRIE
GVDHEFSAIPGVVEDVTEIILNLKQVRFKRQIDEIDNEAVTISISGEEQITAGHFQKFIS
GFQVLNPDQVICTADKKVNLNMEMTIEKGRGYVPAEENKKANAPLGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIVSDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSYNKNDLMKFRNFG
KKSLTELEELVSNKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatactaaattttcagaagcccgataaagttataatgattgattcaaccgatttc
gaagggaaatttgaatttcgccctttggaacctggatatggattaaccgttggtaacgct
ttaagaagagtgcttttatcttcattagaaggttatgcaatcacttctattcgtatagaa
ggcgtagatcacgaattctccgctattcctggagtcgttgaagacgtaacagaaattatc
ctgaaccttaaacaagtaaggttcaaaaggcaaattgatgaaatagataacgaagccgtt
accatttctatatctggagaagaacaaattactgccggtcactttcaaaaatttatttca
ggctttcaagtcctaaatccagatcaggtgatctgtactgcagacaaaaaagtaaacctg
aatatggaaatgaccatagaaaaaggtagaggttatgttccggccgaagaaaacaaaaaa
gccaacgcacctcttggaactatatttaccgattctatttatacaccaataaagaacgta
aaatatagcattgaaaactatcgtgtagagcagaagaccgattatgaaaaattggttttt
gaaatcgtaagcgatggatctattcatccaaaagatgcacttactgaagctgcaaaaaca
cttattcaccactttatgttattctctgacgagcgtatcacgcttgaggcagatgaaata
gcacaaactgaaacttatgatgaagaatctcttcatatgagacagttgcttaaaactaag
ttggtagatatggatctttcagtaagagctttaaattgcttaaaagcggctgaagttgat
accttgggagaccttgtttcttacaataaaaacgacttgatgaagtttagaaacttcgga
aagaaatctttgacagaacttgaagaattggtaagcaacaaagggcttaactttggtatg
gacctttcaaaatacaaattagataaggactaa
DBGET
integrated database retrieval system
