Salegentibacter mishustinae: LDL76_03160
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Entry
LDL76_03160 CDS
T07820
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smis
Salegentibacter mishustinae
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smis03032
]
LDL76_03160 (topA)
03400 DNA repair and recombination proteins [BR:
smis03400
]
LDL76_03160 (topA)
Enzymes [BR:
smis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LDL76_03160 (topA)
DNA replication proteins [BR:
smis03032
]
Prokaryotic type
DNA Topoisomerases
LDL76_03160 (topA)
DNA repair and recombination proteins [BR:
smis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LDL76_03160 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
UBZ07715
LinkDB
All DBs
Position
complement(669111..671663)
Genome browser
AA seq
850 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYKVASSFGHIADLPTKELGVDTDGDFKPKYIVSKDK
KDVVRKLKGFAKDAEMVWLASDEDREGEAIAWHLAEELNLKDEKTKRIVFHEITKSAILK
AIDNPRGINYNLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EIQNFTAEASFRIDAEFATEDGKSFKAKIPKNFDSRKEAEAFLQQNLGADFKVAELTTKP
AKKSPAPPFTTSTLQQEAARKLYFSVSKTMTMAQRLYEAGHITYMRTDSVNLSEDARKGA
KEEILKAYGDKYAKSRQFKGKTKGAQEAHEAIRPTNFANHSVRADRDEQRLYELIWKRAI
ASQMSEAQLERTNVKIEASKHDKQFTANGEVLKFDGFLKVYLEGTDDDEDAEEQNGMLPA
LKENQPLNNKYITATERFTRPPYRYTEASLVKKLEELGIGRPSTYAPTISTIQNRNYIEK
GSVDGTEREYLQFVLKGSDIKENKLTETVGSDKGKLVPTAVGMVVNDFLVNHFSNILDYN
FTARVEQSFDDIAEGNEEWTHMMKEFYEDFHPQVVDVAKNADREVGERILGEDPETGKPV
SVRLGKFGPMVQIGSVEDDEKPKFASLGPDQTLDSVTYEEAMDLFQLPKELGEYKDEKVE
VNNGRFGPYVKFGKKYVSLEKGEDPLNVDFERAMELIKEKEKADAPIHHYEDMPVQKGVG
RFGPFLKWNGIFINVNKKYDFDNLSIEDIETLIEDKKRKEREKLIHNWEEEGIRVEKARW
GRFNIIKGKTKIELPKNTDAENLTLQEVQEILEEKSKKKKKTTKKKAPAKKKTAAKKTTA
KKKTTTKKKK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtgattgtagagtcccctgccaaggcaaaaaccatcgagaaattt
ttaggaaaagattataaggtagcgtccagttttggacatatagccgatttgcctacaaaa
gaattaggtgtagataccgatggcgattttaaaccaaaatatatagtttctaaagacaaa
aaagatgtagttagaaaactaaaaggtttcgccaaagatgcagaaatggtttggttggca
agtgatgaagaccgggagggagaagctattgcctggcaccttgcagaggagctaaatctt
aaagatgaaaaaacaaaaagaattgtttttcacgagatcactaaatcggctattcttaaa
gcaattgataatccaagaggaattaattataacctggtaaatgcccaacaagcgcgtagg
gttttagacaggttggtgggatacgagctttcaccggttttatggcgaaaagtaaaagga
ggtctttctgccggaagagtacaatctgtttcagtgagacttattgtagaaagagaacga
gaaattcaaaattttactgcggaagcttcctttagaatagacgctgaatttgctacggaa
gatggtaaatcttttaaagctaaaattccaaagaacttcgattcacgaaaagaggctgaa
gcatttcttcagcaaaacctgggggcagattttaaggtcgcagaactcactaccaagcct
gcgaaaaaatctccggcaccaccgtttaccacttcaactttacaacaggaagctgcaagg
aagttgtatttttcagtaagtaagaccatgacgatggcgcagcgtttatacgaagccggt
catattacttatatgagaacagattctgttaacctttcagaagatgcaagaaaaggtgct
aaagaagaaattttaaaagcttacggagataaatacgctaaatcaaggcagtttaaagga
aagactaaaggtgcacaagaagctcacgaagcgattaggccaactaattttgccaatcac
tcggtaagagcagatcgggatgaacagcgcttatatgagttgatctggaagcgagcaatc
gcttcgcaaatgagtgaagcgcaattagagcgtaccaatgtgaaaattgaagcttctaaa
cacgataagcagtttactgcaaatggggaggttttgaagtttgatggtttcttaaaagtt
tatttagaaggtacagacgacgatgaagatgcagaagagcaaaacggtatgttaccggct
ttaaaggaaaatcagccgcttaacaacaaatatattaccgcaaccgaacgatttaccagg
ccgccatataggtatacagaagcttctttagtgaagaaactggaagaattgggaattggt
cgtccatctacctatgcgcctacaatttctactattcagaacaggaattatatcgaaaaa
gggtcggtagatggtacagagcgtgaatatttgcaatttgtattgaagggctctgatatt
aaagagaataaattaactgaaaccgttggaagtgataaagggaaattagtgccaactgcc
gtaggtatggtggtgaacgattttcttgtgaatcatttttcaaacattcttgattataat
tttaccgctagggttgaacaaagttttgatgatatcgcggaaggaaatgaagagtggacg
catatgatgaaagaattctacgaagactttcatccgcaggttgtagatgttgccaaaaat
gccgaccgggaagttggggaaagaattttaggtgaagatccggaaactggtaaacctgta
agtgttcgtttagggaaatttggacctatggttcaaattggttctgtagaggacgatgag
aaaccaaaattcgccagccttggtccagaccaaactttagattcggttacttatgaagaa
gcgatggatctttttcaacttccgaaggagttaggagagtataaagatgaaaaagttgag
gtgaataatggccgttttggtccttatgtgaaatttggtaaaaaatatgtttctcttgaa
aaaggcgaagatcctttaaacgtagattttgaacgtgcaatggagttgataaaggaaaag
gaaaaggcagatgcgccaattcatcattacgaagatatgccggtacaaaagggtgtaggt
cgttttggtcctttcctaaaatggaatggtattttcatcaacgtaaataagaaatacgat
tttgataatctttctattgaagatattgaaaccttaattgaggataaaaagcgtaaagag
cgcgagaagttgatccacaattgggaagaagaaggaattagagttgaaaaagcacgttgg
ggtagatttaatatcataaaaggcaagactaaaattgaattgccaaaaaacacagatgcc
gagaatttaactttacaggaggtgcaggagattttagaggaaaagtctaaaaagaagaaa
aaaaccaccaaaaagaaagctccggctaaaaagaaaactgcagctaagaagacgactgcg
aaaaagaaaaccactaccaaaaagaagaaataa
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