Salegentibacter mishustinae: LDL76_04855
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Entry
LDL76_04855 CDS
T07820
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
smis
Salegentibacter mishustinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_11
AAA_12
PDDEXK_1
Cas_Cas4
L_protein_N
DUF5334
eIF3_subunit
Motif
Other DBs
NCBI-ProteinID:
UBZ08042
LinkDB
All DBs
Position
1032447..1035578
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AA seq
1043 aa
AA seq
DB search
MTNNFTIYNASAGSGKTFTLVKEYLLLLFKSEKNDAYKNILAITFTNKAVDEMKSRIISS
LRGFTAEKTSAKNNPLFKIIAEETNLPEAALKTKAAKILKSIIHNYAAFEVSTIDGFTHR
VLRTFAKDLGLPVNFEIALNTRQILMEAVDRLISKAGTDKDLTKVLVAFAISKTDDDKSW
DIAKDLFEISELLIGENHQEALKQLKGKTTEDFRKFKEKISSEIKKTEAIIAETSTEFFD
LVESNNIEEKDFSGGYVYKHFVKLRDKKPIDGFEKAWMLKLESAPLYTKSNKNQAVKDAL
DSIQSLIVSLFEISKRAYLNLDFLEAIRKNLTQLSLLNAINQEVELIKKERNLILISEFN
PKISAQVKDQPAPFIYERLGERYQNYFIDEFQDTSQMQWENLIPLIDNKLSSENPGDPAS
AMLVGDAKQSIYRWRGGKAEQFIDLCLETNPFSIEKRVENLPNNYRSGSQIVNFNNSLFN
YAAGTLQHPSYSSLFQESKQNPQAGDFGYVNIDFIEAENATEEHEIYPEKIFEIIQNLDQ
KNFRKGDICILTRKKKEGVTIANYLSEHNIPVVSSETLLVANSPEVNFIAHLLEFSINPK
DNNLKLELFDFLAEFLEIENRYPIISANLKKDGRAFFHWLKDYDIDFDLDKIRQLSVYES
AEYIIRSFSLVETSNAYVQFFLDFIFESTQKATAGIADFIDLWKQEIENLSIVVPKAEDA
VQIMTIHKSKGLEFPVVIYPYANSDSKSTRMDSLWLPMEAPLDEIPMNYLSASDKMLNWG
PKASDIYSELIHQKELDTLNVLYVACTRASQQLYLLSKKEIDAKGNEKAYKTSGLLIGFL
KEIGRWDSNINTYEFGEIGSPVISEESHSENIISEKFYSSATQNQAVNIVTKSGMLWDSK
QEEAIEKGEILHELLAQINYKGQVNPVVAQAINDGIITKDSAEKIEKLLHEITDHPQLSA
FYSEEAKNYNERDILTPEGKRLRPDRINFLGNTVNIIDYKTGKFDTAHETQINNYAAVLE
GMGYNIGSKNLVYTNKALKVRLV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
ttgactaacaattttaccatttacaatgcttccgcaggatcgggaaaaactttcaccctg
gttaaagaatatttgcttctattatttaaaagcgaaaaaaacgatgcttataaaaacatt
ttagcaattacgtttaccaataaggcggtagacgagatgaaatccaggattataagcagt
ttgagaggttttactgctgaaaaaacttcggctaaaaacaatccgctttttaaaattatt
gctgaagaaaccaatttacctgaagcagcgcttaaaactaaagccgcaaagatcctaaaa
agcattatccacaattacgcagcctttgaagtttctactattgacggatttacccacagg
gttcttagaacttttgctaaagacctgggattacccgtaaattttgagattgctctaaat
acgcggcaaattctaatggaagctgtagataggcttataagtaaagccggcacagataaa
gatctcaccaaagtacttgttgcctttgccataagtaaaaccgatgatgataaaagctgg
gatatcgcaaaagacctttttgaaatctctgaattacttattggcgaaaaccatcaggaa
gcattaaagcaactcaaaggaaaaactactgaagatttccggaaatttaaggagaagata
agttcagaaattaaaaagaccgaagctataattgcggaaaccagtaccgaattttttgac
cttgttgaaagtaataatattgaagaaaaagactttagcggcggatacgtttataaacat
tttgtaaagttaagagataaaaagcctattgatggctttgaaaaagcctggatgctaaag
ctggaaagcgctccactttacacaaagtcgaataaaaaccaggcagtaaaagatgcgctc
gatagcatccaatctttaatagttagtctttttgaaatttcgaaaagagcctatctaaac
cttgattttcttgaggccattagaaaaaacctcacccagctttcacttcttaacgcgata
aaccaggaagtggaacttatcaaaaaggaacgcaacctaattctaatttcagaatttaac
ccaaaaattagcgcccaggttaaagaccagcccgcaccatttatttacgaaaggctcggc
gaacgctaccagaattattttattgatgagtttcaggacacctcgcagatgcagtgggaa
aacttaatcccgctaatcgataataaactttcttctgaaaatccaggagatccggcaagt
gctatgctggtaggtgatgcgaaacagtcaatttaccggtggcgcggtggaaaagccgaa
caatttatagacctgtgtttagaaaccaatccttttagtattgaaaaacgagtagaaaac
cttcccaataattaccgtagcggaagccagattgtaaacttcaacaatagtttattcaat
tatgcagcgggcactttacaacatccctcctattccagtttatttcaggaaagcaagcaa
aatccgcaggctggtgactttggctatgtaaatatcgattttattgaagctgaaaatgct
accgaagaacatgagatttatcctgagaaaatcttcgaaataattcaaaacctggatcag
aaaaacttcaggaagggagatatctgcattttaacccgcaaaaagaaggaaggtgtcact
atcgcaaattatttaagtgagcataatattccggtagtatcttcagaaactttattggtg
gccaattcaccagaagtgaattttatcgctcatttactggaattttcaataaatcctaaa
gacaataatttaaaacttgaactatttgatttcctggccgagtttttagaaatagaaaac
cgctatcctatcatttcagcaaatttaaagaaagacggcagggcattttttcactggtta
aaagattatgatatcgatttcgaccttgataaaataagacaactttcggtttatgaatcc
gcagaatatattattcgaagtttttctttagtagaaacttcgaatgcttacgtccagttt
ttcctggattttattttcgaaagcactcaaaaagccactgccggaatagccgattttatc
gatttatggaaacaagaaatagaaaacctgagtatcgtggttcccaaagctgaagatgcg
gttcaaataatgaccattcataaatctaaaggcctggaatttccggtggtgatttatccc
tatgcaaattccgattccaaaagtacgcgtatggattcactttggttacccatggaggcg
ccattagatgaaattcctatgaattacctgagtgcatcagataaaatgctgaattggggc
ccaaaagcttcagatatttattctgagttgattcatcaaaaagaactggacactttaaat
gtactttatgtagcctgcacccgagcttcgcaacagttgtatttgttgagcaaaaaagaa
attgatgcaaaaggaaatgaaaaagcttataaaacttcaggcttgctgattggcttttta
aaagaaattggaagatgggattccaatattaatacttatgaatttggtgaaattggaagc
ccggtaatttcagaagaaagtcattcagaaaatattatttctgaaaagttttattcttca
gcaacgcaaaatcaagcagtgaatatcgtgacaaaatcgggaatgctttgggatagcaaa
caggaagaagcaatagaaaaaggcgaaattctgcacgaattactcgcacaaataaattat
aaaggccaggtaaaccctgtggttgctcaagctataaacgatgggatcatcaccaaagat
tccgcagaaaaaatagaaaaattgctccatgaaataacggatcatccacagctttcagca
ttttacagcgaagaagctaaaaattataatgagcgtgatattttaactcctgaaggtaaa
agattaaggccagaccgcattaattttttaggaaacacggtgaatattatagattataaa
accggaaaattcgataccgcccacgaaacacaaattaataactatgccgcggttttggaa
ggcatgggctacaacataggaagcaaaaaccttgtttatacaaataaagcgcttaaagtg
cgccttgtttaa
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