Salegentibacter mishustinae: LDL76_05260
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Entry
LDL76_05260 CDS
T07820
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
smis
Salegentibacter mishustinae
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smis02000
]
LDL76_05260
Transporters [BR:
smis02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LDL76_05260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
DNTTIP1_dimer
Motif
Other DBs
NCBI-ProteinID:
UBZ08118
LinkDB
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Position
1125481..1127196
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AA seq
571 aa
AA seq
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MKVTNKIFILFFLALGVASCEKDFLDTPPQDVLVDETYWSSEVNVKTFAYGFYTAYFSGY
GSGYTWGKYFSGQSLNDDFAPTNPPRFTLQVPTSGGGWSFAWVRKANIFIDRVQGVDMEE
EAINHWTGIGRFFRALEYHDLVKAFGDVPYYDQELAENDQEMLYKKRDDRTFVMDRVLED
FRFAAENVRDNVENEGLEVDRSVVLGFMSRVFLYEGTWQKYHENNNEKAAEYLEAAKWAA
QEVIESGNFSLANYREVFNSLDLSGNPEVLLYREYEEGMVTHSLNSYNNKEPQTGVSKDG
IESYLAEDGLPIGISDLYQGDKGIENLMANRDPRIYETFVSDELRINGVDPNYSTTGIAT
HKFLNEEIADEPRGNSNLNPTDAPVIRYGEILVNYAEAAYELSTVGGPAFTQEDLDKSIN
VLRDRPGINLPHLEVSGDQPAVNGQTYDDPQRDPDVAPILWEIRRERRVELMFEGFRLDD
LKRWKKLEYTDMVQYPDINRGAWIDKSNYPDANLENLAVTGGGNEGYLIPASAEESLRTF
DDPRVYLQPIPLDQITLYRDQGVELEQNPGW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaacaaacaaaatatttattcttttctttcttgccttaggtgttgcaagctgc
gaaaaagatttcctggacactccaccacaggatgtcctggtagacgaaacgtattggtct
agcgaagtaaacgtaaaaacctttgcttacggtttttacaccgcatatttttcgggatat
ggctcagggtatacctgggggaaatatttctctggacaaagcttaaacgatgattttgca
cctacaaaccctccaagattcacactacaggttcctacttcaggtggcggatggagcttt
gcctgggtacgtaaagcaaatatctttatagacagggtgcagggggtagatatggaagaa
gaagccataaaccactggacaggtattggaaggttttttagagctttagaatatcatgat
ttggtaaaagcttttggtgacgttccttattacgaccaggaacttgccgaaaatgatcag
gaaatgctatacaaaaagcgcgatgatagaacttttgtaatggatcgtgttctggaagat
tttcgctttgcggcagaaaatgttagagacaatgttgaaaacgaaggcttagaagtggat
agaagcgtagttcttggttttatgtctagagttttcctttacgaaggtacctggcaaaaa
tatcatgagaataataatgaaaaagcagccgagtatcttgaggcagcaaaatgggcggct
caggaagtaattgaatctggtaatttttcattagcaaattatagagaggtatttaattct
ctagatctctctggaaaccctgaagtattactgtatcgtgagtatgaagaaggaatggtt
acacactcccttaacagttataacaataaagaacctcaaacaggggtgtctaaagacgga
attgaatcctatttagctgaggatggtctgcctataggaatttcagacttataccagggt
gacaagggaattgagaatttaatggccaaccgcgatcctagaatctatgaaactttcgtg
tcagatgaattaagaattaatggtgtagatcctaactattcaaccacaggaattgctacg
cataaatttttaaatgaagaaattgccgatgagccaagaggaaattctaacttaaaccct
acagatgcgccggtaattaggtacggcgaaattttggttaactatgcagaggcggcttat
gaattatctacagtaggtggtcccgcttttacacaggaagatcttgataaatctattaat
gtactaagagacaggccgggtattaaccttccgcacctggaagtttctggggaccaacct
gcagttaacgggcaaacctatgatgatcctcaaagagatccagatgtagccccaatccta
tgggaaattcgtcgtgagagaagagttgaattaatgtttgaaggatttagattagacgat
ttaaaacgttggaaaaaactggagtatacagatatggttcagtatccagatattaacaga
ggtgcatggatagataaatcaaattatccagatgccaatttggaaaatcttgccgttacc
ggtggaggaaacgaaggttatttaattccggcatctgccgaagaatcgttaagaaccttt
gatgatccgagagtttaccttcaacccattcctttagatcaaattacattgtatagagat
cagggagtagagttggaacaaaatccaggttggtaa
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