Salegentibacter mishustinae: LDL76_06860
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Entry
LDL76_06860 CDS
T07820
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis03030
DNA replication
smis03410
Base excision repair
smis03420
Nucleotide excision repair
smis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDL76_06860 (polA)
03410 Base excision repair
LDL76_06860 (polA)
03420 Nucleotide excision repair
LDL76_06860 (polA)
03440 Homologous recombination
LDL76_06860 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smis03032
]
LDL76_06860 (polA)
03400 DNA repair and recombination proteins [BR:
smis03400
]
LDL76_06860 (polA)
Enzymes [BR:
smis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDL76_06860 (polA)
DNA replication proteins [BR:
smis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LDL76_06860 (polA)
DNA repair and recombination proteins [BR:
smis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LDL76_06860 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LDL76_06860 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Globin
HTH_Tnp_IS630
HHH
IMS_HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UBZ08429
LinkDB
All DBs
Position
complement(1466151..1468982)
Genome browser
AA seq
943 aa
AA seq
DB search
MSAQKRLFLVDAYALIFRGYYAFIKNPRINSKGFDTSAIMGFMNSLFDVIRREKPDHLAV
CFDKEGSQVRTEMFAEYKANRDATPEPIKDAIPIIQDILKAMHIPVVELAGMEADDIIGT
LAQQAEKENYQVFMVTPDKDFAQLVTENIFMYRPARMGNGIEIWGIPEVQKKFEVERPEQ
VIDFLGMMGDAVDNIPGLPGVGEKTAKKFLKQFGSMEELLANTDQLKGKMKEKVESHAEQ
GILSKKLAAILTDCDVKFHAEDYELSQPDSDKVQEIFDELEFRRLKDQFIKLFSGEEDQQ
QTQVSNSPSAKKVSKTAGEGQFSLFSGDDSEKIEASSGGRKSLKDTAHVYQSLNTKMARQ
MFLQNLMKQSSVCLDTETTSLNALEAELVGIAFSWEPSKGFYLPFPEEREKAQELIEELR
PFFEDEKIEKIGQNLKYDIKVLAKYNIEIKGKLFDTMIAHYLINPDMRHNMDVLAETYLN
YTPQPISELIGKKGKNQKSMRDVPVEEQTEYGVEDADITLQLKKFFEQELKEAETRKLFD
EIEIPLVRVLAAMELEGIKLDENFLKSLSDALDSDIKELEQNIYKEAGEEFKISSPKQLG
IILFEKMELVKKPKKTKTGQYSTSEDVLSVLVKEHKIVEDVLMYRALVKLQNTYVDSLPN
QVQKATGRIHTDYVQTIAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRDENHILLAAD
YSQIELRIIAALSEEDNMIKAFKEGKDIHASTAAQVFNVNIDEVTREQRSNAKTVNFGII
YGVSAFGLSNQTNLSRAEAKELIDTYYKTYPKLTGYIADQVAFARENGYVQTILGRRRYL
KDINSQNAVVRGAAERNAVNAPIQGSAADIIKLAMIKIYRKLTEGRFKTKMLLQVHDELV
FDAHKDEVEEVKKMIQFEMENAYKLEVPLDVELGEGNNWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaaaaacgcctgtttcttgttgatgcttatgccctgatttttagaggttat
tatgcctttattaaaaacccgaggattaattctaaaggttttgatacttcagcgataatg
ggttttatgaattctcttttcgatgtaattaggcgggaaaaaccagatcatcttgccgtt
tgctttgataaagaaggcagccaggttagaaccgaaatgttcgcagagtacaaagctaac
cgcgatgctacaccagagcctataaaggatgcgattcctattatccaggatattttaaaa
gccatgcatattcctgtagtggaattagccggaatggaagccgatgatattattggaact
cttgcccaacaagccgagaaagaaaattaccaggtttttatggtaacgccagataaggat
tttgcccaactggtaaccgaaaatatttttatgtaccgcccggcgagaatgggtaacgga
atcgaaatttggggtatccccgaagttcaaaagaaatttgaagttgaacgtcccgagcag
gtaatagatttccttggaatgatgggcgatgcagtagataatatccctggacttcccggg
gtaggcgagaaaaccgccaaaaaattcctgaagcaatttggaagtatggaagagctgctg
gcaaataccgaccagctaaaaggaaagatgaaagaaaaagttgaaagtcacgccgaacag
ggaattctttctaaaaaactggcagctattcttaccgattgcgatgtgaaatttcacgct
gaagattatgaactctctcaacccgattcagataaagttcaggagatctttgacgagctt
gaattcaggagacttaaagatcaatttataaaattatttagcggagaagaagaccaacag
caaacccaggttagcaattctccttcagctaaaaaagtttcaaaaactgcaggagaagga
cagttttcattgttttcgggagacgattcagaaaaaattgaagccagttctggcggaaga
aaatctttaaaagataccgctcacgtataccaaagcctgaacactaaaatggccaggcaa
atgtttcttcagaacttaatgaaacaaagcagtgtttgtttagataccgaaaccacaagt
ttaaatgcgctggaagcagaactggttggcattgctttttcctgggagccaagcaaaggt
ttctacctgcctttccccgaagaacgtgaaaaagcacaggaacttattgaagaattgcgc
ccgttttttgaagatgaaaaaattgaaaaaattgggcaaaaccttaaatacgacatcaag
gttttagcaaagtataatattgaaattaaaggaaagctttttgacaccatgatcgcgcat
tacctgatcaatccagatatgcgtcataatatggacgtgcttgccgaaacttaccttaac
tatacgccgcaacctatttcagaattaataggaaaaaaaggcaagaatcaaaagtcgatg
cgggatgttcctgttgaagaacaaaccgaatatggcgttgaagatgccgatatcaccctt
cagcttaaaaaattctttgaacaggaattaaaagaagcagaaacccgaaagctttttgat
gaaattgaaattccgctagttagagtgctagccgcaatggaactggaaggcataaaacta
gatgagaacttccttaaatccctttctgatgctttagatagtgatattaaggaactggaa
caaaatatttataaagaagccggggaagaatttaaaatcagctctccaaaacaattggga
attatcctttttgaaaaaatggaattggttaaaaaacccaaaaagacaaaaacgggacaa
tattcaaccagcgaagatgtactctcggttttagtcaaagagcataagatcgtagaggat
gttttaatgtatcgtgctttggtaaaactccaaaatacttatgtagattctttaccaaac
caggtacagaaagctaccggcagaattcataccgattatgtgcaaactattgcagctacg
ggaagattgagttccaacaatcctaatcttcaaaatatcccaattagaaccgagcgtggt
cgccaggttagaaaggcttttgtcccccgggacgaaaatcatattctactcgctgccgat
tattctcaaattgaattacgaattatcgcggcacttagtgaagaagataatatgattaaa
gcctttaaagaaggcaaagatattcacgcttctaccgccgcccaggtttttaatgtaaat
atagatgaagtaacccgcgagcaaagaagcaacgctaaaactgtaaattttggaattatt
tatggtgtttcggctttcggtttaagcaatcagaccaatttatctcgtgctgaagccaaa
gaacttattgacacctattacaaaacctatcctaaattgaccggatatattgcagaccag
gtagcttttgccagggagaacggttatgtacaaaccattttaggcagaaggcgatattta
aaagatatcaattcacaaaatgctgtagtgcgtggcgccgcagaaaggaacgcggttaat
gcaccaatacagggtagcgcagcagatattataaaactagcgatgattaaaatctaccga
aaacttacggaaggcaggtttaaaaccaaaatgttactccaggtgcatgatgaattggtt
tttgatgcccataaagatgaagtagaagaagtaaagaaaatgattcagtttgaaatggag
aacgcctacaaactggaagttcctttagatgtagaattgggagaaggcaataactggctg
gaagcgcattag
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