Salegentibacter mishustinae: LDL76_09055
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Entry
LDL76_09055 CDS
T07820
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL76_09055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smis03019
]
LDL76_09055
03016 Transfer RNA biogenesis [BR:
smis03016
]
LDL76_09055
Enzymes [BR:
smis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LDL76_09055
Messenger RNA biogenesis [BR:
smis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LDL76_09055
Transfer RNA biogenesis [BR:
smis03016
]
Prokaryotic type
tRNA degradation factors
LDL76_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
UBZ05522
LinkDB
All DBs
Position
complement(1955839..1958088)
Genome browser
AA seq
749 aa
AA seq
DB search
MIPQTFKEVIDLGDGREISIETGKLAKQAHGSVVVQMGNAMLLCTVVSSYKESTMDFFPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRIVDRVLRPLFPSDYRTETQVMIQLMS
HDEEVMPDALAGLAASAAIQLSDIPFETAISEARVARIDGEFVINPSRSQLQDSDIDMII
GASSDSVMMVEGEMKEISEEEMAEAIQFAHEHIKKQIDAQLRLAEAFGKKPVREYATAEE
KEDIEKKVRDAAYDKIYEIAKGGHGKKERSEAFSTVKDEVLALFSEEELEENEKLIKKYY
SKTEKEAVRELTLAEGIRLDGRKTDEIRPIWCETDYLPSVHGSAIFTRGETQALATVTLG
TSREANTIDMPTHQGEETFYLHYNFPPFCTGEAYPIRGTSRREIGHGNLAQRALKGMIPE
NNPYTVRIVSEVLESNGSSSMATVCAGTMAMMDAGVKMKKPVSGIAMGLISDGERHAVLS
DILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLPYEILVKALKQARAGRLHILEKLTD
TIAEPNENVKAHAPKIITRRIPNEFIGALIGPGGKVIQELQKTTGCEIVINEDPVTEEGI
VEILGTKQEGIDKVLAKIDSITFKPEKGSVYEVKVIKVLDFGAVVEYVDAPGNEVLLHIS
ELAWERTDNVTDILNIGDVIDVKYFGVDPKTRKEKVSRKALLEKSEGYQARPPRDNDRND
RGRDNRGSRDNRGRDDRRGRDNKDRRNND
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaaacatttaaagaggttatcgatttaggagacggaagagaaatctctatc
gaaaccggaaaattagcaaagcaggcccacgggtcggttgttgttcaaatgggcaatgct
atgttgctttgtactgtagtatcttcttacaaagaaagtactatggatttctttccacta
actgtagattacagggaaaaatttgctgccgcaggtcgttacccgggcggtttctttaaa
agagaagcaagaccaagtgacggggaagttttaacaatgagaattgtagaccgtgtattg
cgtccacttttcccgtcagattatagaacagagactcaggtgatgatccagttgatgtct
cacgacgaagaagttatgccagatgctttggcaggacttgctgcttcggcagctattcag
ctttcagatattccttttgaaactgctatttctgaagctcgtgtagccagaatagatggt
gaatttgtgataaacccaagccgtagccaattacaggattctgacatcgatatgattatt
ggtgcctcttcagattctgtaatgatggttgaaggtgagatgaaagaaatttcagaagaa
gaaatggccgaggctattcaattcgctcacgaacacatcaaaaaacaaatagacgcacaa
ttgcgtttagctgaagcgtttggtaaaaaaccggttagggaatatgccactgctgaagaa
aaagaagatatagagaaaaaagttcgcgatgcggcttacgataaaatttacgagattgct
aaaggcggtcacggtaaaaaagaacgcagcgaagcattttctacagtaaaagacgaagtt
ttagctttattttctgaagaagaattagaagaaaatgaaaagctgatcaagaaatattat
agcaaaaccgaaaaagaagcggtaagagaacttacgcttgctgaaggtattcgtcttgat
ggtagaaaaaccgacgaaattagacctatctggtgtgaaaccgattatttaccatcggta
cacggttcggctattttcactcgtggtgaaactcaggctttggcaactgttactttgggt
acttccagagaagcaaacaccatagatatgccaactcaccagggtgaggaaactttctat
ttacattataatttccctccattttgtaccggagaagcttacccaattagaggtacttca
agacgtgaaataggacacggaaaccttgctcaacgtgcattaaaaggaatgattcctgaa
aacaatccttacacagtaagaatcgtttctgaagtattagaatctaacggatcgtcttct
atggcaacggtttgcgccggaactatggcaatgatggacgctggggttaaaatgaaaaaa
ccggtttctggtatcgctatgggattaatttctgatggtgagcgtcatgctgtactttca
gacattcttggagatgaagatcatcttggggacatggactttaaagtaaccggaacggct
gacgggattaccgcttgtcaaatggatattaaagtaaaaggacttccttacgaaatctta
gtaaaagcgctaaaacaagctcgcgcaggaagacttcatattctagaaaaacttactgat
actattgctgagccaaacgaaaatgtaaaagctcacgctccaaaaatcatcaccagaaga
attcctaacgaatttattggtgcattgattgggcctggaggaaaagtgattcaggaactt
caaaaaactacaggatgtgaaatcgttattaacgaagaccctgtaaccgaagaaggcatt
gttgaaattcttggaacaaaacaagaaggtatagataaagttcttgcaaaaatagattct
atcacctttaagcctgaaaaaggaagtgtttacgaagtaaaagttattaaagttcttgac
tttggtgctgtagtagaatatgttgatgctcctggcaacgaggttttacttcacatctct
gaactggcttgggaacgcacagataacgtaaccgatattcttaatattggagatgtaata
gatgtaaaatactttggtgtagaccctaaaacccgtaaggaaaaagtttcaagaaaagca
ttgcttgaaaaatctgaaggttaccaggcaagaccaccaagagacaacgatcgtaacgat
agaggtcgtgacaaccgtggttctcgagacaatcgtggtcgtgatgatcgcagaggcaga
gataataaagatcgtagaaataacgattaa
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