KEGG   Salegentibacter mishustinae: LDL76_12130
Entry
LDL76_12130       CDS       T07820                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
smis  Salegentibacter mishustinae
Brite
KEGG Orthology (KO) [BR:smis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smis03016]
    LDL76_12130
Enzymes [BR:smis01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     LDL76_12130
Transfer RNA biogenesis [BR:smis03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    LDL76_12130
 Prokaryotic type
    LDL76_12130
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 Anti-Pycsar_Apyc1 PDEase_II DUF6144
Other DBs
NCBI-ProteinID: UBZ06113
LinkDB
Position
2621040..2621948
AA seq 302 aa
MKLNILGCYAATPRSFTNPTSQVLEMKNELFLIDCGEGTQVQLRRNKIKFNKIKHIFISH
LHGDHCYGLVGLISTFRLLNRENELHVYGPKGIKEIITLQLKLSNSWTNYPLYFHELESK
EPLVIYEDEKLSVETIPLIHRIYTNGFLFKEKPGDRKLLIDKAVSYNIDVSLFKSIKKGK
DVTSESGELIPNHLVTADPEPTKSYAYCSDTAFNQKMIPQISGATVLYHESTFLEDKAQL
AFPTKHSTAKEAALIAKEAGVKQLILGHYSTRYPNINLFREEAATIFPEVDLADDGKVFI
FE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaagcttaatattcttggttgttatgccgctaccccgcgtagttttactaatcctact
tcccaggtgctggaaatgaaaaacgaattgtttttgatagattgcggtgaaggaacccaa
gtacaactaagacgaaacaagataaagtttaacaagataaaacatatctttatttcccac
ctgcacggggatcactgttacggtcttgtaggtcttatttcaacttttaggcttttaaat
agggaaaatgagttgcatgtttatggcccaaagggaataaaggagattatcacgctgcag
ttaaaattatctaattcctggactaattacccactttactttcatgagcttgagagcaaa
gaaccgctggttatttatgaagatgaaaaacttagtgtagaaactattcccctgatacat
agaatttataccaacggttttctctttaaagaaaagccgggagatcgcaaattacttata
gataaagccgttagctataatatagacgtttctttatttaaaagtataaaaaaaggaaag
gacgtcacctcagaatctggagagctaattcctaaccatcttgttactgcagatcccgag
ccaaccaagagctatgcttattgcagtgatactgcttttaaccaaaagatgattccacaa
attagtggtgctacggttttataccatgaatctacttttcttgaagacaaagctcaatta
gcctttccaacaaaacacagtacagctaaagaagctgcgctaattgccaaagaagccggg
gtaaagcaacttattctaggccattattctacgcgatatcccaacatcaatttatttaga
gaagaagccgcaactatatttccggaggttgatttagccgatgacgggaaggtttttatc
tttgaataa

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