Salegentibacter mishustinae: LDL76_12275
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Entry
LDL76_12275 CDS
T07820
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smis
Salegentibacter mishustinae
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smis03032
]
LDL76_12275
03400 DNA repair and recombination proteins [BR:
smis03400
]
LDL76_12275
Enzymes [BR:
smis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LDL76_12275
DNA replication proteins [BR:
smis03032
]
Prokaryotic type
DNA Topoisomerases
LDL76_12275
DNA repair and recombination proteins [BR:
smis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LDL76_12275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
FeeM
Motif
Other DBs
NCBI-ProteinID:
UBZ06140
LinkDB
All DBs
Position
complement(2661407..2662483)
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AA seq
358 aa
AA seq
DB search
MTISPEEVNSLISNPYEAVDFANLTYVSEEKLSISRKKVGRGFSYIYKGERIKDKKTIDR
IKSLVIPPAWQEVKITHLKSGHLQVVGRDEKNRKQYIYHPTWSKLRNKSKFFKMAAFGEN
LPKIRKQVDKDLDLPEMSKRKVLALILRLMEETHIRIGNHYYAKKNKTYGLSTFRTRHVK
TYKNRIKFEFIGKKGKEHSVTVKNKKLIKLVNQCEEIPGWELFKFYDESGDKHSIDSGMI
NDYIHEISGDLFSAKDFRTWSATKIFFETLREIGYTEEEKQNKKNMLQAFDASAEGLGNT
RAVCRSYYVHPKVVNSYESGEIVPYFDKIKSEEKQDYISLSETEKVILNMIKDYEVNI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttctcccgaggaagtaaacagcctaatttctaatccctatgaagctgtagat
tttgccaatctcacctatgtttctgaagaaaagctttctattagccgcaaaaaagtgggc
cgcggtttttcctatatatataaaggagaacgtataaaggacaagaaaaccatagatcgc
ataaaaagcctggtaataccacccgcctggcaggaagttaagatcactcatctaaaaagt
ggccatttacaagttgtgggccgtgatgagaaaaacaggaaacaatatatttaccatcct
acctggagtaaattaagaaacaaatctaaattttttaaaatggctgcctttggcgaaaat
ctgccaaaaattagaaagcaggtagataaagacctggatcttccggaaatgagtaagcga
aaagtactcgccttgattctaagacttatggaagaaacccatattagaatcggaaatcat
tattacgcaaagaaaaataaaacttacggactttctacttttagaacccgccacgtaaaa
acttataagaacaggattaaattcgagtttataggaaagaaagggaaggaacattcggta
accgtaaaaaacaaaaaacttataaaactggtaaatcaatgtgaagaaatcccgggttgg
gaactttttaaattttacgatgaaagtggagataagcactctatagacagcggaatgatc
aacgattacattcacgaaattagcggtgatctattttcagctaaagattttagaacctgg
agcgccactaaaatattctttgaaaccctgcgggaaatcggctatacagaggaagaaaaa
caaaacaaaaagaatatgcttcaggcttttgatgcctcggccgaaggtttgggcaacaca
cgcgcggtttgccgtagttattacgtgcatcccaaggtggttaattcttacgaatccggg
gaaattgttccttattttgataaaattaaatctgaagaaaaacaagattatatctctctt
tccgaaaccgagaaagtcattttaaatatgatcaaagattatgaagttaatatttaa
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