Salegentibacter mishustinae: LDL76_16775
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Entry
LDL76_16775 CDS
T07820
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smis
Salegentibacter mishustinae
Pathway
smis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDL76_16775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smis03019
]
LDL76_16775
03400 DNA repair and recombination proteins [BR:
smis03400
]
LDL76_16775
Enzymes [BR:
smis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDL76_16775
Messenger RNA biogenesis [BR:
smis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LDL76_16775
DNA repair and recombination proteins [BR:
smis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LDL76_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Pribosyltran
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UBZ06999
LinkDB
All DBs
Position
3666961..3668997
Genome browser
AA seq
678 aa
AA seq
DB search
MNRQQAELKLKENFDFSKFHDEQWETINLLFQGKRVLLIEKTGFGKSLCFQFPATQFEGV
TVIFSPLIALMRDQVRNLTAKGIKANYINSEQTPEENSRIIQEAINGKIKILYIAPERQD
NQEWMDATRHMNLSMVVIDEAHTISVWGHDFRPAFRRIINLVKLLPKNLPVLATTATATK
RVQIDIENQISGDLTTIRGKLLRENFELFVIKVQSEDEKLIWLLENIKSLPGTGLIYTGT
RVNTEIYSRWLEFLGVPSREYNAGLDGDTRKEVEKGLMENKWKTIVSTNALGMGIDKADI
RFIIHTQIPASPIHYYQEIGRAGRDGKPTKLILFYNNKKDEKGIEEDFKLPKAFIDGGRP
SIKNYNKVIDVLKQELLGERQIIKATNLKQTQVRVIKADLIDQGIIKEVKFNKSKKFEYQ
YNAPQLNTKTFDELRNQKLTELHSMVDYVNLNSSRMKYLCDYLGDQTNTTYQNCDNSNLS
SLKLNFKTTSKEKLQEFRETYFPELVVETKTSKIVNGVASSYYGVSTVGAALHRCKYENG
GDFPDFLLKLTLKAFRKRYKQEKFDLMLYVPPTESGDLVKNFAEKISRILQITISHKLQK
TRDTKPQKVFKNGYLKRDNVQNVFTFPEPNEIRGKSILLFDDIFDSGATLKEIGNILTRN
GAKKIAPLVIARTVGGDI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacagcaggcagaattgaaattgaaagagaatttcgatttcagcaagtttcac
gatgagcaatgggaaacaattaatcttctttttcagggaaaaagagttttattaatcgag
aaaactggttttggaaaatcgttatgcttccaattcccggctacacaatttgaaggagtt
accgtgatcttttctccgctaattgctttgatgcgagatcaagttagaaatctaactgca
aagggaataaaagcaaattatattaactctgaacagactcctgaagaaaattccagaatt
atccaggaagcgataaacggaaaaataaaaattctctatatagctcccgaacgtcaagac
aaccaggaatggatggatgctaccagacatatgaatttatcaatggtagttattgatgaa
gctcatacaatttctgtttggggtcatgatttcagaccggcatttcgaaggataatcaac
cttgtaaaacttttacctaaaaacctacctgtacttgccacaacagcaactgcaacaaaa
agagttcaaatagacattgaaaaccagatttctggtgaccttacaacaatcagagggaaa
cttcttcgggaaaattttgaattatttgttataaaagttcaatccgaggatgaaaaactt
atttggttattggaaaatattaaaagtcttcctggcacaggactgatctacacaggaacc
cgggtgaatacggaaatctattcccgttggttagagttcttaggtgtaccatcgagagaa
tataatgcaggattggatggagatacaagaaaggaagtagaaaaaggtttgatggaaaat
aaatggaaaacaattgtctccaccaatgcgttaggtatgggaatagacaaagccgacatt
cgatttatcattcacactcagattcctgcatcaccaatacattattatcaggaaatagga
agagctggaagagatggtaaaccaaccaaattaattctattttataataacaaaaaagat
gaaaaaggtattgaggaggattttaagctccctaaggcttttatagatggtggccggccg
agtattaaaaattacaataaggtgattgatgtacttaagcaagaactccttggagaaaga
cagatcattaaagcaactaatttaaaacaaacccaggttagggtaattaaggcggacctt
attgatcagggaataattaaagaagtaaaatttaataaatcaaagaaatttgaatatcag
tataatgccccgcaactcaacactaaaacctttgatgaacttagaaatcaaaaattaact
gaactccactcaatggttgattatgtaaaccttaactcctcaagaatgaaatatctctgt
gattacttgggagaccaaacaaatacgacctatcaaaattgtgataacagtaacctttca
tccttaaaactcaattttaaaaccacatcaaaggaaaaattacaggaattccgtgaaact
tattttccggagctagtagtagaaaccaaaacttcaaaaatagtaaatggagtagcctct
agttattatggggtttcaacggttggagcagcacttcatagatgtaaatatgaaaatgga
ggagattttcccgattttttactaaaattgacattgaaagctttccgtaaacgttacaaa
caggaaaaatttgatttaatgctatatgtgcctcctacagagtctggtgacctggtcaaa
aattttgcggaaaaaatttcaagaattttacagatcacgatatctcataaattgcaaaaa
accagagatacaaaaccacaaaaagtttttaaaaatggatatcttaaaagagataatgtt
caaaatgtttttacatttccagaacctaacgaaataagaggaaaatccattctgcttttt
gatgacatctttgatagtggtgctactcttaaagagataggtaatatccttacaagaaat
ggtgcaaaaaaaattgcacctttagtgattgcaagaacggtgggaggcgacatttaa
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