Sphingobacterium mizutaii: 4412673_00045
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Entry
4412673_00045 CDS
T05395
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase [decarboxylating]
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00260
Glycine, serine and threonine metabolism
smiz00630
Glyoxylate and dicarboxylate metabolism
smiz00670
One carbon pool by folate
smiz00785
Lipoic acid metabolism
smiz01100
Metabolic pathways
smiz01110
Biosynthesis of secondary metabolites
smiz01200
Carbon metabolism
Module
smiz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
4412673_00045 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
4412673_00045 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
4412673_00045 (gcvP)
00670 One carbon pool by folate
4412673_00045 (gcvP)
Enzymes [BR:
smiz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
4412673_00045 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
SNV35289
UniProt:
A0AAJ4X850
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Position
1:37316..40189
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AA seq
957 aa
AA seq
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MSNIFYQEKFEDRHNGPSSAQVEEMLNVLSVGSLDELIDQTVPAQIRKKQALNLPPALSE
VAYLEKIAQIAEKNKVFKSYIGQGYNDVILPGVIQRNVFENPGWYTQYTPYQAEIAQGRL
QALLNFQTMVSDLTGLEIANASLLDEATAAAEGMFMLYSTRKNKDANVFLVTPNVYPQTL
DVLQTRAVPFGVEIRVADLTVENLTDDVYATYIQYPAADGTVNDYKEFTAYAHDKDITVC
VGTDLMSLALLTPPGEWGADVVVGNSQRFGVPMGFGGPHAAFFATKDTYKRNIPGRIIGV
TSDSNGEYALRMALQTREQHIRRDKASSNICTAQALLAIMASFYAVYHGPKGIKNIASRI
NDLTKLADKAIQALGYKQVNESYFDTLRFDVGKEVDGLKSEALNHELNFFYQDGTVGISI
DETTTFDDIQTIVKVFAKVKGKHITDVDMDAIVKELGTSIPEHLERSSEYLTHPVFNSYH
SESEMLRYIKSLEAKDLSLCHSMIPLGSCTMKLNATTEMVPVTWARFGGLHPFAPVDQTS
GYMQLINELNDWLCEITGFAKMSFQPNSGAQGEYAGLMVIRAYHHSRGDFDRNICLIPAS
AHGTNPASASMAGLKVVVVKCDDRGNIDVEDLKAKATEHSANLNSLMVTYPSTHGVFEEP
IVEICNIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGP
IGVAAHLVPFLPNHEIIEISGEEGISAVSAAPFGSASILVISHAYIAMMGGEGLTNATKT
AILNANYIKARLEQHYPVLYAGANGRCAHEMILDCRGFKNVGIEVADIAKRLMDYGFHAP
TVSFPVAGTLMVEPTESESKPELDRFCDALIGIRSEIAAVENGDADQKDNVLKNAPHTAR
VVTGDDWDRPYSRQTAAYPIEYLRVNKFWPSVGRVNDSQGDRTLICSCPPMEAYAEI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacatattttaccaagaaaaatttgaggatcgccataatggtccaagttctgcg
caagtagaggaaatgttgaacgtgctttcagtgggttctttggatgaattgatcgatcag
accgttcctgcacagattcgtaagaaacaagctttgaaccttcctcctgcacttagtgag
gttgcgtatttggaaaaaatagctcaaatagctgaaaagaacaaggtattcaaatcttat
atcggtcagggatataacgatgtgatccttcctggggttatccaacgtaatgtatttgaa
aatccaggatggtatacacaatatactccttaccaagcggaaattgctcaaggacgtttg
caagccctattgaacttccaaaccatggtttcagacctaactggtttagaaatcgcaaat
gcttccctattggatgaagcaactgctgccgcagaaggtatgttcatgctgtacagcaca
cgcaaaaacaaggatgctaatgtgttcttggtaactccaaacgtatatcctcaaacatta
gatgtattgcaaaccagagccgttcctttcggcgttgagatacgtgttgctgatttaact
gtagagaacttaacagacgatgtgtacgccacatatattcaatatcctgcagctgacggt
acggtaaatgactataaagaatttacggcctatgcacatgataaagacattactgtatgt
gttggtacagacttaatgtcattggctttgttgactcctccgggagaatggggtgctgat
gttgttgtgggtaactcccaacgctttggtgtaccaatgggatttggtggcccgcatgca
gcattctttgcaactaaagacacttataaacgtaatattccaggaagaatcattggtgtt
acttctgattcaaacggagaatacgcactacgtatggcgcttcaaactcgtgagcaacat
atccgtagagataaagcatcttcaaatatctgtacagcacaagctttgttagctatcatg
gcttccttctatgctgtataccacggtccaaaaggaatcaaaaacatcgcttcccgtatc
aatgacttgacaaaattagctgataaagcaatccaagcattaggctacaaacaagtcaat
gaatcttacttcgatacccttcgttttgatgtaggcaaggaagttgatggattgaaaagc
gaagctttgaaccatgaacttaacttcttctaccaagatggtacagtaggtatctctatc
gatgagacaaccacttttgatgatatccaaaccatcgtgaaagtatttgctaaggttaag
ggcaagcacatcactgatgtggatatggacgctatcgttaaggaattaggaacttccatt
ccggagcacttagaaagatcttctgagtacttgactcacccagtattcaacagctaccac
tcagagagtgaaatgcttcgttatatcaaatcattagaggcgaaagacctttcattatgc
cactctatgattccattgggatcatgtaccatgaaattgaatgcaacaaccgagatggtt
ccagttacttgggctagattcggtggattgcatccatttgcaccagttgatcaaacatct
ggttacatgcaattgatcaatgaattgaatgattggttatgtgaaatcacaggattcgct
aagatgtctttccaaccaaactctggtgcacaaggtgaatacgctggattaatggtaatc
cgtgcttatcaccatagccgtggagatttcgatagaaatatctgtttgatccctgcatca
gcgcatggtaccaacccagcatctgcttctatggcaggtctgaaagtggtggtggttaaa
tgtgacgatcgtggtaatatcgatgttgaagatttaaaagctaaagctactgaacattcg
gctaacctgaattctttgatggttacttatccatcgactcacggtgtattcgaagaaccg
attgttgagatctgtaatatcatacacgagaatggtggtcaagtatatatggacggtgca
aatatgaatgctcaggtaggtttgactagcccaggcttcattggtgcagacgtttgtcac
ttgaacttacacaagactttctgtattcctcacggtggtggtggtccaggtatgggtcca
atcggcgtagcagcacatttggttcctttcttgcctaaccatgagattatcgagatctca
ggagaagagggtatttcagccgtttcagcggctccatttggttcagcctctatcttggtc
atctcacacgcttacatcgctatgatgggcggagaaggccttacaaacgcaactaagacg
gctatcttgaatgccaactatatcaaagctcgcctagagcaacattatccagtattatac
gctggtgcgaatggacgttgtgcacacgagatgatcttggattgccgtggatttaaaaat
gtaggcatcgaagtggcagatatcgctaagcgtttgatggactacggtttccacgctcca
actgtttcattcccagtggctggtactttaatggttgaaccgacagaatccgagtcaaaa
ccagaattagatagattctgtgatgccttgatcggtatccgttcagaaattgctgcggtt
gagaatggagatgcagaccaaaaagacaacgtattgaaaaatgcgcctcatactgcaagg
gtagtaacaggtgatgactgggatagaccatattctcgccaaactgctgcttatccaatc
gaatacttaagagtaaacaaattctggccttcggtaggtcgtgtgaatgattcccaagga
gatagaaccttaatctgttcttgccctccgatggaagcatacgcagagatctaa
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