Sphingobacterium mizutaii: 4412673_00156
Help
Entry
4412673_00156 CDS
T05395
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
4412673_00156 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_00156 (xseA)
Enzymes [BR:
smiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
4412673_00156 (xseA)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
4412673_00156 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
SNV36551
UniProt:
A0AAJ5BYM8
LinkDB
All DBs
Position
1:166491..167762
Genome browser
AA seq
423 aa
AA seq
DB search
MPELMDNKTVFTLLEVSRSIQKTIAERYKSLYWIKAEMNKLNHYSHSGHCYPELLEKKEG
KVVAEMRSILWKMDYQRINRQFLEVLGEPLREGITMLFQAGISYDPLYGFSLKIVDIDPT
FVLGELEKEKRESIKKLTEEGVFDANKRLPFPLIPKRLAIISVETSKGLSDFFKIINGNP
WGYKIECTLFPALLQGDKSISSIIKQLEVIANKLEDFDAVAIIRGGGGDVGLSSYNNYFL
SKAIAIFPIPVLTGIGHSTNETVSEMVAYKNAITPSELADFLLQKFHNFAIPVDNALERM
LRAVRRNFEEENLKLKHIVSSISWNSKTLLLKDKSELNGLQTHLIRFSRQNIKENQAQLQ
HLERMLGIVNPIHILKRGFSIVRIDGKSVHKLDQVEIGAELEIQLEDGKVISKVINKESK
HGK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgatggacaataaaaccgttttcacactcctagaggtatctcgaagcatt
caaaagactattgctgagcgatacaagagtctttattggattaaggcggagatgaataaa
ttgaaccattattcccattcagggcattgctatcccgaattattagagaaaaaagaaggt
aaggtggttgctgagatgcggtctattttatggaagatggactaccaacgcataaacagg
cagttcttggaagtccttggcgaacccttaagggaaggcattaccatgctcttccaagct
ggtatttcctacgacccactttatgggttcagccttaagattgtggatattgacccgact
ttcgttcttggcgaactcgagaaagagaaacgagaaagcattaagaaactcacagaagaa
ggtgtttttgatgccaataaaagactgccttttccccttattccaaagcgcttggcgatt
atctccgtagaaaccagcaagggcttatccgatttctttaagatcatcaatggcaatcct
tggggttataaaatagaatgcacactgttccccgccttgttgcaaggggataaatccatc
agttccattattaaacaattggaggtcatagccaataaactggaagattttgatgccgtt
gcgatcattcgtggtggtggaggtgatgtcggattgagctcctataataattatttcctt
tcgaaagctatcgccattttcccgattcccgtacttactggaattggtcactcgacaaat
gaaaccgtcagtgagatggttgcttataagaatgccattacaccgagtgaattggcggac
ttcctgctacagaagttccacaactttgccattcctgtagataatgcgctggaaagaatg
ctaagggcggttagaaggaactttgaagaggaaaacctcaaattaaaacatatcgtttca
tccatttcctggaactctaagaccttattattaaaagataagtcagaattaaatggccta
caaacccatctaatcaggttcagtaggcaaaacatcaaggaaaatcaagcgcaattgcag
catttggaacggatgctgggaatcgtgaatcccatccatattttaaaaagaggcttcagc
atcgttagaatagatggtaaatctgttcataaattggatcaggtcgaaataggggccgaa
ttggaaatccaattggaagacggaaaggtcatttctaaagtaattaacaaagaatcaaag
catggaaaataa
DBGET
integrated database retrieval system
