Sphingobacterium mizutaii: 4412673_00162
Help
Entry
4412673_00162 CDS
T05395
Symbol
uvrA_1
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4412673_00162 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_00162 (uvrA_1)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4412673_00162 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
4412673_00162 (uvrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
AAA_21
AAA_16
nSTAND1
AAA_29
DnaJ_CXXCXGXG
nSTAND3
RsgA_GTPase
AAA_22
AAA_23
ATPase
NACHT
cobW
Viral_helicase1
DUF5975
PheRS_DBD1
Motif
Other DBs
NCBI-ProteinID:
SNV36607
UniProt:
A0AAJ4X8C5
LinkDB
All DBs
Position
1:174835..177642
Genome browser
AA seq
935 aa
AA seq
DB search
MQKTAIHSPKTHIQIKGARVNNLKNIDVDIPKNQLVVITGMSGSGKSSLAFDTLYAEGQR
RYVESLSSYARQFMGRMNKPDVDYIKGIAPAIAIEQKVISSNPRSTVGTSTEIYDYLKLL
FARIGKTISPVSGEEVSKDTVSSIVDKLLAYPDDTTITIYSPLIPSNNRKLKEELSLLLQ
KGFVRVKYQDSIQKIETIIEDKAVSNASFKEGEVYIVIDRVRLDHEDDTINRLADSVQTA
YFEGKGECEIQVDEELFHFSDKFELDGITFEEPTPNFFSFNNPYGACKRCEGYGKIIGID
PDLVIPDKSRSVFDGAIAPWRGEKMGAWLDKLVRTAIKFDFPIHRAYSDLTKAQQELLWE
GNKYFRGLNDFFAELEEQTYKIQYRVMLSRYRGKTDCPECKGTRLRKDASYVKINGHSIT
DVVLLPLSEALEMFQNLKLTENEAIIAKRLLAEIVNRLQFLCDVGLSYLTLNRLSNSLSG
GESQRINLATSLGSSLVGSIYVLDEPSIGLHPRDTQKLIGVLKSLRDAGNTVIVVEHEQE
MMEAADYLIDIGPEAGINGGELVFAGTYQEILKDKNSLTGEYLHGDLSIVVPEKRRKWNE
SIRVNGARENNLKGITVDFPLNVFTVVSGVSGSGKTSLVKRILYPALQKAIGSYSGEQTG
LYDGIEGAIDQIEQVEMVDQNPIGRSTRSNPVTYVKAWDEIRALYSSLPAAKANGLKPSA
FSFNVEGGRCEVCQGEGVVKIEMQFMADIILPCEACDGKRFKQHVLDVQYKEKSVSDILD
LSVDEAIEFFADQPKILNKLGPLQEVGLGYVKLGQSSSTLSGGEAQRIKLASFLIKGNNQ
KKTMFIFDEPTTGLHFHDISKLLKAFNALIAQGNTVLVIEHNLDMIKSADWVIDIGPEGG
DKGGNIVFAGTPEDLVKNKDSYTGDFLKRHLNFKP
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaactgctattcattctccaaaaacccatatccaaattaaaggcgcccgtgtc
aacaatctaaagaatatcgatgtcgatattcctaaaaatcagcttgttgtcattacggga
atgtcgggttctggaaaatcttccctcgcatttgatacgctatatgctgaaggccagcgc
cgatacgtagaaagcttgtcctcctatgcaagacagtttatggggcgtatgaacaagcct
gatgtagactacatcaaaggcatcgctccggccattgctatcgagcaaaaggtcatatcc
agcaatcctcgatcaacagtagggacctctacagaaatctatgattacctgaaattattg
tttgccaggataggcaagaccatttccccagtttctggagaagaagtcagtaaagatacc
gtcagttccattgtggataaactgttggcttatcctgacgatactaccataacgatttac
agccccctgattccgagcaataacagaaagctgaaagaagagctttcactgctccttcaa
aagggctttgttcgcgtaaaataccaagattccatccagaagattgaaaccatcattgaa
gataaagcggtatcaaacgctagcttcaaagaaggggaagtctatatcgtaatcgaccgc
gtgcgcttggatcatgaagatgatactatcaatcgcttggcggattcggtacaaacggcc
tatttcgaaggaaaaggtgaatgtgagatccaggtcgatgaagaactgttccatttttct
gacaaatttgaattggatgggataaccttcgaagaacctacgccgaactttttcagtttc
aacaatccttatggcgcctgtaagcgctgtgaaggttatggaaagatcatcggtatcgat
ccagacttggttattcctgataaaagccgttccgtgttcgatggggcaattgcaccatgg
cgcggtgaaaaaatgggtgcttggttagataaattggtcaggacggcaataaaatttgat
tttcctatacatcgtgcttatagtgacctgaccaaggctcaacaagagttgctttgggaa
gggaataaatatttcagaggcttaaacgacttctttgcggaattagaagaacagacctat
aaaatccaatatagagtgatgttgtccaggtatagaggcaagacggactgcccagaatgt
aaaggtaccagattgcgaaaagatgcctcttacgtaaagatcaacgggcattccattaca
gatgtggtcttattgcctttaagtgaagccttggaaatgttccaaaacttaaaacttaca
gaaaacgaagccattattgccaaacgcttgttggccgagattgtcaaccgcttgcaattc
ctctgtgatgttggtctgagctatcttaccctgaaccgattgagcaatagcctttcgggt
ggtgagtcgcagcgtatcaacctagcaacatccttgggttcctctttagttggctccatc
tatgtattggatgaaccaagtattggtctgcaccctcgggatacccaaaagttaatcggt
gttctaaaatcacttcgcgatgcgggaaatactgtgatagtggttgagcatgagcaggaa
atgatggaagctgccgattacctgatcgatattggtcctgaagcaggcatcaatggcggt
gaactagtgttcgcaggtacctatcaagaaatcttgaaagataaaaatagcttaaccggc
gaatatttacatggagacctttccattgtagttcctgagaaaagaaggaaatggaatgaa
agcatccgcgtaaatggcgctagagaaaataacttgaaaggaataaccgtagatttccca
ttgaatgtatttaccgtagtttctggtgtatcgggttccggtaagacctctttggtcaaa
aggatcctatatcctgccctgcaaaaggccattggctcttattctggcgagcaaactggt
ctgtatgatggaatcgaaggtgcgatagaccagatcgaacaggtggaaatggtcgaccag
aatccaatcggaaggtctacacgctccaatccagtgacctatgtgaaagcttgggatgaa
atcagggctttgtattcctccttgccagcggccaaagccaacggcttgaaaccatcagcg
ttctcattcaatgtggaaggcggaaggtgtgaggtttgtcaaggagaaggtgttgtaaag
atcgaaatgcaatttatggccgatatcatcctgccatgtgaggcctgtgatggcaagcgt
tttaaacaacatgtcttggatgtgcagtataaggagaaatcggtatctgatatcttggat
ctgagcgtggatgaagccattgaattctttgctgaccagccaaagatcttgaacaagctt
ggacctttgcaagaagtgggtttaggctatgtgaaattagggcagtcttcgagcacgctc
tctgggggtgaagcccaaaggatcaagctagcttccttcttgatcaaaggaaacaatcaa
aagaaaaccatgtttattttcgatgagccaacaactggtctgcatttccatgatatcagc
aagttgttgaaagcattcaatgcactgattgctcaagggaatacggttttggtaatcgaa
cataacttagatatgatcaaatctgccgattgggtaatcgatatcggtccggaaggtgga
gacaagggcggaaacattgtctttgccggaacgccggaagatttggtcaaaaataaagac
tcttatacgggtgattttttaaaacgtcacctaaattttaaaccctaa
DBGET
integrated database retrieval system
