Sphingobacterium mizutaii: 4412673_00238
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Entry
4412673_00238 CDS
T05395
Symbol
pbpA
Name
(GenBank) Penicillin-binding protein A
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00550
Peptidoglycan biosynthesis
smiz01100
Metabolic pathways
smiz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
4412673_00238 (pbpA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
4412673_00238 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smiz01011
]
4412673_00238 (pbpA)
Enzymes [BR:
smiz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
4412673_00238 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
smiz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
4412673_00238 (pbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
SNV37714
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All DBs
Position
1:258260..259906
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AA seq
548 aa
AA seq
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MVPDRGVIYDRNGKILVWNRPFYDLQVIPNEVRDIDTLSMCKWLKIDRQEFISRIERAKS
YSRFKPSVFYQNISVERFAALQEHLFEYKGFQVVMKSSRYYPYGVAAHVLRDVAQTESRG
FPKSDRFYEKGDRLGISGIEKAYESYLRGEKGIKNMVADVHNRPQGSFANGKYDREPVYG
MELSSTLDIDLQEFGEKLMGKRKGSIVAIEPNSGEILAFVSSPTFDPNDLIGDKRAEGFK
KLLNDPDKPLFVRPIQAQYPPGSVFKVVSALIAQEMGEITGSTVLNCPGGYRYGRNGYMG
CTHVHGPINLSQSIQTSCNTYYGHIYSAILEGGDVLPSQQYDIWRDKVMKFGIGRRIGID
IPGEKPGLLPPSQYYSKRFGNEKWMSGYNISLSIGQGEMGITALQMANIMAIVANRGYYY
TPHLVKMMDNSVLEFSRHSVEIKDRFFEPVIQGMSMAVNQPGGTAYSVRISGTEMCGKTG
TAQNPHGENHAVFFGFAPRKDPKIAIAVFVENAGYGSTWAAPIGSMMIEKFLHGKVTIPD
HIYQRIIN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctgatagaggggtgatctatgacagaaatggaaagattttggtatggaacagg
ccgttttacgacttacaggtcatcccaaatgaggtgcgggacattgatacgctttcaatg
tgtaaatggctgaaaatcgatcgacaggaattcataagccggatagaaagagcgaaaagt
tattccagatttaaaccctctgttttttaccagaacatatcagtggagcgatttgccgcc
ttgcaggagcatctatttgagtacaaaggtttccaggtagtgatgaaatcgtccagatat
tatccttatggggtagccgcacacgtcttacgggatgtagcacaaaccgagtcccgaggt
ttcccaaaaagtgacaggttctacgaaaagggtgaccgtttaggtatttctggaatagaa
aaggcctatgagagctatctgaggggagagaagggaataaaaaatatggtcgctgacgtc
cataaccgcccccagggaagttttgcaaatgggaaatatgaccgagaacctgtatatgga
atggaactctctagtaccctggatattgatctccaagaatttggagagaaactgatgggg
aaaagaaaaggaagtattgttgcaatcgaacctaattcaggagaaatattagcctttgta
agcagtccgactttcgatcccaatgatctgattggggacaaaagggcagagggatttaaa
aaattgcttaatgacccggataaaccactatttgtaagacccattcaggcccaatatcca
cccggttcagtctttaaagttgtcagtgcccttattgcacaggaaatgggagaaattact
ggatctactgttttaaactgtccggggggataccgatatggtaggaacggctatatggga
tgtacccatgtgcacggacctataaatctgtcccaatcgatccaaacctcttgcaatacc
tattacggtcacatttattcagcaatacttgaaggaggtgatgtcttacctagccaacag
tatgatatctggagggataaagtgatgaagtttggtatcggcaggagaattggtattgat
attccaggcgaaaaaccgggtttgttgcctcccagccaatattatagcaagcggtttgga
aatgaaaaatggatgtcgggatataacatttcactatcgatcggccagggagaaatgggt
attactgcactgcagatggctaatataatggctatagtggcaaataggggttattattac
actcctcaccttgtgaaaatgatggacaatagtgttttggaattttctcggcattcggtt
gaaataaaggaccgtttttttgaaccggtcatccaaggcatgagcatggcggtaaaccag
ccgggcggcacggcatattccgtaaggatctctggaacggagatgtgtggcaaaactggc
actgcccaaaacccccatggagaaaaccatgctgtcttctttggttttgccccacggaaa
gatcccaagatcgcgatagcagttttcgttgagaatgcaggttacggaagcacctgggct
gcacccattggcagcatgatgatagaaaaattcctccatggaaaggtcactatacctgat
cacatataccagaggatcataaattaa
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