Sphingobacterium mizutaii: 4412673_00411
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Entry
4412673_00411 CDS
T05395
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00300
Lysine biosynthesis
smiz00470
D-Amino acid metabolism
smiz01100
Metabolic pathways
smiz01110
Biosynthesis of secondary metabolites
smiz01120
Microbial metabolism in diverse environments
smiz01230
Biosynthesis of amino acids
Module
smiz_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
4412673_00411 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
4412673_00411 (dapF)
Enzymes [BR:
smiz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
4412673_00411 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
SNV40971
UniProt:
A0AAJ5BYU3
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Position
1:complement(438155..438943)
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AA seq
262 aa
AA seq
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MSKEIQFYKYQGAGNDFILIDNRKGSFDANNQQLIQQICDRRFGIGGDGLMLLQDTNNYD
FQMLYFNADGKEGTMCGNGGRCLVAFARDLGIISRDTVFLAVDGRHDAQIQQNIVNLGMI
DVNEYSMDGEAFVLNTGSPHYVEFVEDLAHKNVFQDGYAIRNNSTYGEKGINVNFIEPEE
NGYFVRTFERGVEDETYACGTGAVASAMSVALKSGKDGDFQIPIRVLGGQLSISFHKVGH
QFSKVYLSGPAIQVFQGKIDIS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaaatccaattctataaataccaaggtgcaggtaatgattttatcttgatt
gacaacagaaagggctcgtttgatgccaataaccaacaattgattcagcagatctgtgac
aggagatttggaattggtggggacggattaatgctgcttcaagatacaaataattatgat
ttccaaatgctttacttcaatgcagatggaaaggaaggcaccatgtgtgggaatggaggg
cgctgtttggtagcctttgccagagatttgggaatcatctcacgcgatactgtctttttg
gcagtagacggaaggcatgatgctcaaattcagcaaaatattgtaaatcttggcatgatt
gacgtgaatgaatacagcatggatggggaagcatttgtcctaaacacaggttctccacat
tatgtcgagtttgttgaagatttggcacacaagaatgtcttccaagatggctatgccatt
cggaacaacagcacctatggcgaaaaaggaatcaatgtcaactttatcgaaccggaagaa
aacggatatttcgtaaggacctttgaacgtggtgtagaggatgaaacctatgcctgtggc
actggcgctgtcgcttcagccatgagtgttgctttgaaatcgggcaaagacggtgatttt
caaattccaatccgggtattgggtgggcagcttagcatttctttccacaaagtgggccat
caatttagcaaagtgtatctttcgggacctgcaatccaagtatttcaaggaaaaatcgat
atttcataa
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