Sphingobacterium mizutaii: 4412673_00637
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Entry
4412673_00637 CDS
T05395
Symbol
uvrA_2
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4412673_00637 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_00637 (uvrA_2)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4412673_00637 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
4412673_00637 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_25
nSTAND3
AAA_23
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
SNV42348
UniProt:
A0AAJ4X8T4
LinkDB
All DBs
Position
1:complement(710051..712900)
Genome browser
AA seq
949 aa
AA seq
DB search
MAVKKAVDLGDQSELEVFGARVHNLKNIDVSFPRNQLVVITGLSGSGKSSLAFDTIYAEG
QRRYMETFSAYSRQFLGGMERPDVDKISGLSPVISIEQKTTSKNPRSTVGTITEIYDFLR
LLYARIGEAYSYVTGKKMERMSDDEITDRILNEFNGEGIYVLAPVVKGRKGHYRELFEQI
RKQGYTKVRVDGEILDIAPKMQVDRYKIHDIEIVVDRIIVEKDSRKRLFTSIGQALKTAK
GIIKIANKENKEQFFSRYLMDAESGISYDEPQPNTFSFNSPYGACPKCDGLGYIYEIDKK
IVIPDRSQSIQKGGIIPLGPVKDSWNFAVLKAVAKKYDFALTTPIDKLPEELIDNLLFGE
EEPINLTVSYGSYGAREYKVQFAGIFKMLEEMSAKYSDDTQGLDEFRTQVVCPECHGARL
KKESLHIRVADKNISELAEMDIVALNEWFDGVENKLSDRQNIIAVEIIKEIKTRIGFLLD
VGLNYLTLNRSSKSLSGGEAQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINALK
NLRDIGNSILVVEHDKDMILHSDYVIDMGPAAGVHGGKVVAQGTPKQLMKENTLTTDYLN
GTREIKVPEERRKGNGHTLTLKGATGHNLKNVSIDIPLGELVLVTGVSGSGKSSLITNTL
YPILNHHFFRAKAKPLPYAKIEGLENIDKVIEIDQSPIGRTPRSNPSTYTGVFSDIRALY
VQLPEAKIRGYKPGRFSFNVKGGRCETCQGAGMKIIEMNFLPDVQVPCETCNGKRYNRET
LEVRYRGKSISDVLDMSIDEAVTFFENIPSIYRKIKTLQDVGLGYITLGQSSTTLSGGEA
QRVKLATELSKKDTGKTFYILDEPTTGLHFEDVNVLLGVINRLVDRGNTVLIIEHNLDVI
KAADWVIDMGPEGGKNGGKVLFQGTPEDLIKQKNSETGRFLKIEMNYNK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaaaaaaagcagtagaccttggggatcaaagcgaattagaagtatttggtgcc
cgcgtacacaaccttaaaaatatagacgtatcatttccaagaaaccaacttgtcgttatc
acgggattaagtggcagcggtaagtcttcattggcttttgacacgatctatgccgaaggt
cagagacgatatatggagactttctcagcatacagccgccaatttttgggagggatggaa
agacccgatgtggacaaaatatcaggattgagcccagtaatttccattgagcaaaaaacc
acttccaaaaacccgagatcaaccgtagggaccataacagaaatatatgacttcctgagg
ttgttgtatgcaaggatcggtgaagcatactcttatgttaccggcaaaaaaatggaacgt
atgtctgatgatgaaatcacggaccgtatcctcaatgaattcaacggagaaggaatctat
gtcctagctccagtggtaaagggccgtaaaggtcattatcgtgaactttttgaacagatc
agaaaacagggttataccaaagttcgcgtggatggagaaatattggatattgctcctaaa
atgcaggtagaccgttataaaatccacgatattgaaatcgtggtagaccgcatcatcgtg
gagaaggattcacgaaaaaggctcttcacctccatcggtcaggctttaaaaacggcaaag
gggatcatcaagattgccaataaggagaataaggaacaattcttcagtcgatatttaatg
gatgcggagtcagggatttcctatgatgagccgcagccgaataccttctcgtttaactcg
ccttatggcgcttgtccaaaatgtgatggtttgggatatatctatgaaatcgataaaaag
atcgtcatccctgacagaagccagagcatccaaaaaggtgggattatccctttgggaccg
gttaaggattcatggaattttgcggtgctgaaagcagtggccaagaaatatgatttcgca
ttgaccacgccaatcgataagctgccggaagaactgatcgacaaccttctttttggtgaa
gaggaaccgatcaacttaacggtttcttatggttcttatggagcaagggaatataaagtt
caattcgccggcatcttcaagatgttggaagagatgagcgcaaaatacagtgatgataca
caaggtttggatgaattccgtactcaggtagtttgtccagagtgccatggggcgcgattg
aaaaaagaatccctccatatcagagtggcagataagaatatttcagaattagcagaaatg
gatattgtcgccttgaatgaatggttcgatggcgttgaaaacaagctttcagatagacag
aacattattgccgtcgagatcattaaagaaatcaagacccgtatcggattccttttggat
gtaggcttgaattacctgaccttgaaccgtagctctaagagcttatccggtggagaggca
cagcgtatccgtttggcgacccaaattggttcacaattggtgaatgtactttatatcttg
gatgagccgagtattgggctgcaccaacgtgacaatgagcgtttgatcaatgccctaaaa
aaccttcgtgatatcgggaactccattttggtggtagaacatgataaggacatgatcctt
cattcggattatgtgatcgacatgggaccagcagccggtgttcatggtggtaaagttgtc
gcccaaggtacgcctaaacaattgatgaaggaaaacaccttgacgaccgattacctcaat
ggaacccgggagatcaaagtcccagaggaaagaagaaaaggaaatggccacacactaact
ttaaagggcgctacaggccataatttaaagaacgtgagcattgatatccctttgggagaa
ttggtgcttgtaacgggcgtatcgggctctggcaagtcgagcttgattaccaataccctt
taccctatcttgaaccatcatttctttagggctaaggcgaaaccgctgccttacgctaaa
atcgaaggtttggaaaatatcgataaggtcattgaaatcgatcaatctcctatcggtaga
acgccaaggtcaaacccttctacctatactggtgtattctcggatatccgtgctttatat
gtacaattaccggaagccaagatcaggggttacaagcctgggcgtttttcttttaatgtg
aaaggtggtagatgtgagacttgtcagggtgctggaatgaagatcattgagatgaacttt
ttgcccgatgtacaggttccctgtgaaacctgtaacggaaagcgctataaccgagagact
ttagaggtaagataccgtggaaagtctatttcggatgtattggacatgagcatcgatgag
gcggtaactttctttgagaatatcccatctatctatagaaaaatcaagaccctacaggat
gtaggtttgggttatattaccttaggccaatcgtcaaccaccctttctggtggtgaagcc
caaagggtcaaattagcaacagagctttctaaaaaagatactggaaagactttctatatc
ttggatgaaccgacaactggtctgcatttcgaggatgtcaatgtattattgggggtaatc
aatcgtttggttgaccgcggaaataccgttttgattatcgagcataacctcgatgttatc
aaagcagccgattgggttatcgacatgggtcctgaaggtggtaaaaacggcggaaaagtc
cttttccaaggaacaccggaagatttgatcaaacagaaaaactcggaaacaggaaggttc
ctgaaaattgaaatgaactacaataaataa
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