Sphingobacterium mizutaii: 4412673_01101
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Entry
4412673_01101 CDS
T05395
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
smiz
Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smiz03110
]
4412673_01101 (clpC)
Chaperones and folding catalysts [BR:
smiz03110
]
Heat shock proteins
HSP100
4412673_01101 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_18
IstB_IS21
TniB
AAA_3
AAA_14
AAA_7
UVR
AAA_25
ATPase_2
AAA_24
bpMoxR
RsgA_GTPase
NACHT
DNA_pol3_delta2
DUF815
Torsin
Motif
Other DBs
NCBI-ProteinID:
SNV45584
UniProt:
A0AAJ5BZF6
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All DBs
Position
1:1260403..1262964
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AA seq
853 aa
AA seq
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MEAKFSPRVKDVISYSREEALRLRHDYIGTEHLLLGLIREGDGVAIKILKNIGVDMGAVR
QSVEDAVKGSSVSRSPISNMPLTKQAEKVLKITYLEAKIFKSDIIGTEHLLLAILRDEEN
IASQILQQFNVSYNVFKTEVEQNATGITDEASSTPPGGDEEYADEDSQFSSPKKVSDIKS
KTPVLDNFGRDLTKAAEEGKLDPIVGREKEIERVSQILSRRKKNNPILIGEPGVGKSAIA
EGLALRIIQRKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPDVILFI
DEIHTIVGAGGASGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALDRRFQKVT
VEPTSIDDTIEILNRIKDKYEEHHNVTYTPEAIDACVSLTTRYITDRFLPDKAIDALDES
GSRVHLNNIHVPQSIIDIEEKIEEVKVEKNKVVRSQKYEEAAKLRDTEKKLIEELEKEKA
AWEAETKTKRYTVTEDNVAEVVSMMTGIPVQRVSQSDSQKLLNMGESMKGRIIGQDDAVQ
KLVKAIQRTRAGLKDPKKPIGSFIFLGPTGVGKTELAKELARFMFDSEDALIQIDMSEYM
EKFAVSRLVGAPPGYVGYEEGGQLTEKVRRKPYAVVLLDEIEKAHPDVFNLLLQVLDEGQ
LTDSLGRKVDFRNTIIIMTSNIGARQLKEFGQGVGFTTAAKENQADSHSRGVIETALKRA
FAPEFLNRIDDVIVFNSLTKEHIFKIIDIELRSLFARIEGLGHKINLTEAAKNYIAEKGY
DSNFGARPLKRAIQKYLEDPIAEEILKGELKTGDTILVDYDDEKKDIVVSSSKNEKDDDS
SLASDVKNNKKKD
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaaattttcaccccgagttaaagatgttatatcatatagtcgtgaggaggct
cttcgcttacgtcacgattatatcggtaccgaacatctattgctaggattaatacgtgag
ggcgatggagtggcaattaagatattgaagaatatcggagttgacatgggcgcagtccgc
caatcagtggaggatgctgtgaaaggttcttccgtttcacgttctccaattagtaatatg
ccgctaactaaacaagccgaaaaggtcttgaagattacttatttggaagctaaaattttt
aaaagtgatatcattgggactgaacatctcctgttagctatattacgtgatgaagaaaac
atcgcatcacaaatcttacagcaattcaatgtttcatataacgtattcaaaaccgaagtc
gaacagaatgccactggcatcactgatgaagcttctagtacgcctccaggaggtgacgaa
gaatacgctgatgaagattcacaattctcttcacctaaaaaagtatctgatatcaagtct
aaaaccccggttctagataacttcggacgcgacctgaccaaagccgccgaagaaggtaaa
ttggatcctatcgtaggtcgtgagaaagaaattgaaagggtttcacagattctttcccgt
agaaagaaaaacaaccctatcctgatcggtgagcccggtgtcggtaaatcagctatcgct
gaaggcctagcactgcgtatcatccaaaggaaagtatctagagtactcttcaacaaacgt
gtggttaccttagacctagcatcgctagtggctggtaccaagtatagaggtcagtttgaa
gaacgtatgaaagccgtaatgaatgagttggaaaaatcccctgacgtaatcttgtttatc
gacgagatccacaccatcgtcggtgcaggtggtgcctctggttcattagacgcttcgaat
atgttcaaacctgccttggcacgtggagagatccaatgtatcggtgctactactctagat
gaataccgtcagtatattgagaaagatggtgctttagaccgtcgtttccaaaaagtgact
gtagaacctacttctatcgatgatacaatcgaaatcttgaaccgtatcaaagataaatat
gaggaacaccacaatgttacttatacgccagaagctattgatgcctgtgtgtcattgacc
acaagatatatcacggatagattcttgccagataaagctatcgatgctttagatgaatca
ggatcacgtgtacacttgaacaatatccatgttcctcaatccatcatcgatatcgaagag
aaaatcgaggaagttaaggtggagaaaaacaaggttgtccgcagtcagaaatatgaagaa
gctgccaaacttcgtgatacggaaaagaaattgatcgaggaattggagaaagaaaaagcc
gcttgggaagcagaaaccaaaacaaaacgctataccgttacggaggataatgtagctgaa
gtggtttccatgatgactggtatcccagtgcaacgtgtcagccaatccgatagtcaaaaa
ctactcaacatgggtgagtccatgaaaggtaggatcattggtcaggacgatgcggttcag
aaattggtgaaagccatccaacgtacgcgtgcaggattgaaagatcctaagaaacctatc
ggttcctttatcttcttaggtcctacaggtgttggtaaaactgaattggcaaaagagctt
gcgcgctttatgtttgattctgaagacgccttgatccaaatcgatatgagtgaatacatg
gagaaattcgctgtgtctcgcttagtcggtgcgcctccgggatacgtaggatacgaagaa
ggtggtcagttgaccgagaaggttcgccgtaagccatacgctgtcgtgttattggatgag
attgaaaaagctcaccctgatgtattcaacttgttgttgcaagtcttggatgaaggtcaa
ttgacagatagccttggtcgcaaggttgactttagaaacaccatcatcatcatgacttcg
aatatcggtgctcgtcagttgaaagagttcggtcaaggtgtaggatttactacagcggcc
aaagaaaaccaagctgactcgcattcaagaggggtaatcgaaactgcattaaaacgtgca
ttcgcgcctgaattcttgaaccgtatcgatgatgtgatcgtgtttaactcattgacaaaa
gagcatatcttcaaaatcattgatatcgaacttagatcattatttgcccgtatcgaaggc
ttaggtcataaaattaacttgactgaagctgccaaaaactacattgctgaaaaaggatat
gacagcaactttggcgcaagacctttgaaacgtgctatccaaaaatacctggaagatcca
atcgctgaagaaatcttaaaaggagagcttaaaaccggtgatactatcttggtggactat
gatgatgaaaagaaagacatcgttgtttcttcttcgaagaacgaaaaggacgatgactct
tcactagcttctgatgtcaagaacaacaagaaaaaagattaa
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