KEGG   Sphingobacterium mizutaii: 4412673_01507
Entry
4412673_01507     CDS       T05395                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
smiz  Sphingobacterium mizutaii
Pathway
smiz00740  Riboflavin metabolism
smiz01100  Metabolic pathways
smiz01110  Biosynthesis of secondary metabolites
smiz01240  Biosynthesis of cofactors
smiz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smiz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    4412673_01507 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    4412673_01507 (ribD)
Enzymes [BR:smiz01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     4412673_01507 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     4412673_01507 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC_N
Other DBs
NCBI-ProteinID: SNV48212
UniProt: A0AAJ4XAF1
LinkDB
Position
1:1700912..1701940
AA seq 342 aa
MKRCLELAVLGAGKTSPNPMVGAVIVHNGEIIGEGYTSPYGGPHAEVNAVRSVIDQVGEA
KARELFSESTIYVSLEPCAHFGKTPPCADMIVDMGFKEAVIACLDPFAKVNGLGLKKLQD
AGIRTEVGVMEDDAKWVNRRFFTKLKEFRPYVILKWAETADGYFAPVLGQRWISNQASKQ
LVHKWRSEEDAILVGKRTAELDNPSLTVREWQGRNPKRILIDKNLELPESLSIFDEAAET
IIFNAKKTDWQGNRKYIELENFDLYLPQQILYQLYLMDVQSIIVEGGRKTLDLFIQAGLW
DEARVFVGAESWAEGIQAPKLIGDLKEEIQVGSDQLKIYLPN
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaagcgatgtttggaattggctgtcttaggggcaggcaagaccagtccgaatccgatg
gtgggggcagtgattgtccataatggagaaattataggagagggttatacatcgccttat
gggggtccacatgcagaggtgaatgcggttcgatcagtgatcgatcaggttggggaggcg
aaggccagggaactgttttcagagagtacgatctatgtgagtttggaaccttgtgcgcat
tttgggaagactccaccttgtgcagacatgatcgtggacatgggcttcaaggaagctgtg
attgcctgtttggatcctttcgcaaaggtcaatggtttgggtttaaagaagttgcaggat
gcggggattcgcactgaagtaggggttatggaggatgatgctaagtgggtgaaccgcagg
ttctttacgaagctgaaagagtttaggccttatgtgatcttgaagtgggcagaaacggcc
gatggatatttcgcaccggtattggggcagcgctggatcagcaatcaggcgagtaagcaa
ttggtgcataaatggcgttcggaggaagatgcaattctggttggaaaaaggactgcagaa
ctcgataatcccagtctcaccgttagggaatggcaaggtcggaatccgaagcgcattttg
attgacaagaacctggaacttccggaaagcctttcgatttttgatgaagcagcagaaacc
attattttcaatgcgaaaaaaaccgattggcaggggaaccgaaaatatatagaactggag
aattttgatctctaccttccgcagcaaatcctatatcaattgtacttgatggatgtgcaa
tccatcattgttgaaggaggaaggaagacgcttgacctgtttatccaggcaggactttgg
gatgaagcccgcgtatttgtaggtgccgaatcatgggcagagggtattcaagcccctaaa
ttaataggggacttaaaagaagagatacaagtaggttctgatcaattgaaaatttacctt
cctaactaa

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