Sphingobacterium mizutaii: 4412673_01547
Help
Entry
4412673_01547 CDS
T05395
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smiz
Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smiz03032
]
4412673_01547
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_01547
Enzymes [BR:
smiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
4412673_01547
DNA replication proteins [BR:
smiz03032
]
Prokaryotic type
DNA Topoisomerases
4412673_01547
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
4412673_01547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RAP
DUF4982
Motif
Other DBs
NCBI-ProteinID:
SNV48405
UniProt:
A0AAJ5BZY1
LinkDB
All DBs
Position
1:complement(1744663..1745703)
Genome browser
AA seq
346 aa
AA seq
DB search
MEKSFTHSSIDKIKGLKYVDSNITGFSRIKKGKGFSFVDQKKKIISDPKTLARISSLVIP
PNWENVWICPYKSGHLQATGYDIKGRKQYIYHPKWNALRKEDKFAMLLPFAKGLSSLKKR
IKRDLRRKEIDLQKVTALALQIMDLTSMRAGNQFYEKTNGSYGLTTLKNRHLSIDKNKIT
FKYIGKKGVPQEKNLTAKRLAQILKKVKSIPGQQLFQFEDQNQQVHQLDSGHLNEYLYQV
YQKHITCKTFRTWNACFLCLELFLNSEYAEDPKLRKLHAQEIIKTVAKKLGNSKSVALKH
YIHPKLISDYEMGTLGNWIKYNKESSASEKEKRIKARLIKIIGAQK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcctttacccatagttcgatcgataagattaaaggccttaagtatgttgac
agtaatattaccggcttttcaagaataaaaaagggtaaggggttttcctttgttgaccaa
aagaaaaaaattatttctgacccgaaaacactagctagaatttcttctttggtcatccct
ccgaattgggaaaacgtctggatctgtccttataaatcaggtcatcttcaagctacgggg
tacgatataaaaggaagaaaacaatatatttaccacccgaaatggaatgccttgaggaag
gaagataaatttgccatgcttctcccctttgctaaagggctaagtagtttaaaaaaacgg
atcaaacgggacctcagacgaaaagaaatcgacctccaaaaagtaacagccttagccttg
cagatcatggatctaacctccatgcgcgcaggaaatcaattttacgaaaaaacgaacggc
tcctatggcttgacaaccttaaaaaaccgacatctttccattgataaaaataaaatcacg
tttaaatatataggtaaaaaaggggttcctcaggaaaagaaccttaccgcaaagaggctt
gctcagatattaaagaaagtaaagtcgattcctggacagcaattattccaatttgaggat
caaaaccagcaagtccatcaattggattctggacatttgaatgaatatttgtaccaggtt
tatcaaaaacatataacctgcaaaacttttaggacttggaatgcctgttttttatgctta
gaactatttttaaacagtgaatatgctgaagatcccaaacttagaaaattgcatgcacag
gaaattataaaaactgtggccaaaaaattaggtaatagcaaatcagtggccctgaaacat
tatatccacccaaaattgattagtgattatgaaatgggaacattaggaaactggatcaag
tataacaaggaaagttcggctagcgaaaaggaaaagaggatcaaagctagattaataaaa
ataattggggctcaaaaataa
DBGET
integrated database retrieval system
