Sphingobacterium mizutaii: 4412673_01682
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Entry
4412673_01682 CDS
T05395
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00906
Carotenoid biosynthesis
smiz01100
Metabolic pathways
smiz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
4412673_01682
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
smiz01006
]
4412673_01682
Enzymes [BR:
smiz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
4412673_01682
Prenyltransferases [BR:
smiz01006
]
Terpene biosynthesis
Squalene/phytoene synthase
4412673_01682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
SNV49076
UniProt:
A0AAJ5C031
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All DBs
Position
1:1933150..1933986
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AA seq
278 aa
AA seq
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MKQLFDELSYSVSKITTQKYSTSFSLGILSLKPSIRSAIYAIYGYVRLADEIVDSFHGYD
KEKLLSRLKTETYVALHEGISLNPILQSFQETVNLFKIDIILIEKFLHSMEMDLRKIDYN
SALYEEYIFGSAEVVGLMCLQVFTDGDAERYKELEPYAMKLGSAFQKVNFLRDLRDDYQV
LGRTYFPDIDMRIFDNCVKCRIEKEIEEEFRIAFVGIKKLPSSARFGVYLAYRYYLSLFQ
KIKRRSSKEILNNRIRVPNAEKAYVAFKSYVRYKTAFL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgtttgacgaactttcatactcggttagcaagataacaacccagaaatat
agcactagtttttccttgggaatcctgtcgctgaaaccctcaattcgatctgcaatatat
gccatatatgggtacgtgagattagccgatgaaatcgtggatagttttcatggatatgat
aaagagaagctcttgagccggttaaaaacagaaacctatgttgcacttcacgaggggata
tcccttaatccaatccttcaatcctttcaagaaacggtaaatctttttaaaatagacata
atactaattgaaaagtttttgcatagtatggaaatggatctgcggaaaatagactacaat
tcagcgctatatgaagaatatatttttggttccgcggaagtagtcgggttgatgtgcctg
caagtttttacggatggcgacgccgaaaggtataaagaactggaaccttatgcaatgaaa
ttaggctccgcttttcaaaaagttaattttttaagggatttgagggatgattatcaggtt
ttgggaaggacctattttccagatatcgatatgcgcatatttgataattgcgtgaaatgt
cggattgaaaaggaaatagaagaagagtttagaattgcttttgttggaattaagaaactg
cccagctccgctaggttcggtgtatatttagcttataggtactatttgtcattgttccaa
aaaataaaaagaagatcctccaaagagatattgaataataggattcgggttcccaatgcc
gaaaaggcatacgtggcgttcaaaagttatgtacgatataaaacggcttttttatga
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