Sphingobacterium mizutaii: 4412673_01982
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Entry
4412673_01982 CDS
T05395
Symbol
icd_1
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00020
Citrate cycle (TCA cycle)
smiz00480
Glutathione metabolism
smiz00720
Other carbon fixation pathways
smiz01100
Metabolic pathways
smiz01110
Biosynthesis of secondary metabolites
smiz01120
Microbial metabolism in diverse environments
smiz01200
Carbon metabolism
smiz01210
2-Oxocarboxylic acid metabolism
smiz01230
Biosynthesis of amino acids
smiz04146
Peroxisome
Module
smiz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
smiz_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
4412673_01982 (icd_1)
09102 Energy metabolism
00720 Other carbon fixation pathways
4412673_01982 (icd_1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
4412673_01982 (icd_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4412673_01982 (icd_1)
Enzymes [BR:
smiz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
4412673_01982 (icd_1)
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Gene cluster
GFIT
Motif
Pfam:
IDH
DUF5363
FMN_red
Motif
Other DBs
NCBI-ProteinID:
SNV50219
UniProt:
A0AAJ4XBK8
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All DBs
Position
1:2261845..2264058
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AA seq
737 aa
AA seq
DB search
MSSKIIYTKTDEAPLLATYSFLPIVQAFAKTADIEVELRDISLAGRILANLNEYLSEDQK
TTDALAELGQLATTPDANIIKLPNISASIPQLKGAIAELQKAGYNIPNYPDAPANEEEEK
IRAAYAKVLGSAVNPVLREGNSDRRAPKAVKNYAKANPHRMGAWASDSKTSVTSMQDGDF
YSSEQSLTLDADSQFKIEFVAANGETKELKGLAKLKAGEVIDSSVMHVAKLKEFVAQAIQ
EAKEAVVLLSAHLKATMMKVSDPIIFGAIVEVYFKEVFEKYDALFKELGINKNNGLGEVY
AKIAGTPQEAEVKAAIDAAIANGPDLAMVNSDKGITNLHVPSDVIVDASMPAMIRIGGKM
WDKNGAERDTLAIIPDRSYAGIYEAVIEDCKVNGAYDPKTMGSVPNVGLMAQKAEEYGSH
DKTFQAPSNGVIKVLDNNGKTLMEQQVEEGDIFRMCQTKDASIQDWVKLAVNRARLSATP
AVFWLDENRAHDREIIKKVNTYLADHDTNGLDIRILSPIEATKFSIDRIRKGEDTISVTG
NVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVEQFLEEGYLRWDS
LGEFLALQASLEHLAQTQNNEKSQVLADALDEANAKFLANDKSPARKVGQIDNRGSHFYL
ATYWAEALANQTKDAELASKFAGLAKALTEQEAKINEELIAAQGKAQEIGGYYYPNDELA
AKAMRPSETLNAAIASL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaagatcatttacacaaaaacagatgaagcgcctttattggcaacgtattca
tttctacctatcgttcaagcattcgcaaaaactgctgatattgaagtcgaattaagagat
atttcattggcaggacgtatcctagctaatttaaacgaatatttatcagaggaccaaaaa
actactgatgcgttggcagaattaggacaattggcaactactcctgatgcaaacatcatt
aaacttcctaatatttcagcttctatccctcaattaaaaggagcaatcgctgaattgcaa
aaagctggatataacattcctaattacccagatgcacctgcaaacgaggaagaagagaaa
atcagagctgcttatgctaaagttttaggatctgcagtaaaccctgttttacgtgaagga
aactctgaccgtcgtgcgcctaaagctgttaagaattatgcgaaagctaatccacacaga
atgggagcttgggcttcggatagcaaaacgagcgtaacttctatgcaagatggcgatttc
tacagctcagagcaatcgttgaccttagatgcagacagccagtttaaaattgaatttgtt
gctgcaaatggtgaaacgaaagaattaaaaggtcttgcgaagttgaaagctggcgaagta
atcgattcttctgttatgcatgttgctaaattgaaagaatttgttgcgcaagctattcag
gaagctaaagaagctgtggttttattgtcagctcacttaaaagcgaccatgatgaaggtt
tctgacccgatcatctttggtgctatcgttgaagtttatttcaaagaggtatttgaaaaa
tatgatgctcttttcaaagaattaggtatcaacaaaaataatggcttaggtgaagtatat
gcaaaaatcgcaggtactccgcaagaagctgaagtaaaagcggctatcgatgctgcaatt
gcaaacggacctgatttagcaatggtgaattcggataaaggaattaccaacctacatgtt
ccttctgatgttatcgtagatgcttctatgccagcaatgatccgtatcggtggaaaaatg
tgggataaaaacggtgctgaacgcgatacattggctatcattccggatagatcttatgca
ggaatctatgaagcagttattgaagactgtaaagtaaatggtgcttacgatcctaaaacg
atgggttctgttcctaacgttggattaatggctcaaaaagctgaagaatatggttcacac
gataaaactttccaagctccttcaaatggggtaatcaaagttttagacaacaatggtaaa
accttgatggaacaacaagttgaagagggtgatatcttccgtatgtgccaaactaaggat
gcttcaatccaagactgggttaaattagctgtaaatcgcgctcgcttgtcagctactcca
gctgtattctggttagatgaaaaccgtgctcacgatagagaaatcatcaaaaaagtaaac
acttacttggctgatcacgatactaatggattagacatccgtattttgtcgccaattgag
gctacaaaattctctattgatagaatccgcaaaggtgaggatactatttcagttactgga
aacgtattacgtgactacctaactgacttattcccaatcctagaattaggtacttcagct
aaaatgttatctatcgttccattgatgaatggcggtggtttatttgaaaccggtgctggt
ggttctgctcctaagcacgttgagcaattcttggaagaagggtacttacgttgggattca
ttaggtgaattcttggcattacaagcttcattagaacatttagctcaaacacaaaataat
gagaaatctcaagtattagcggatgcccttgatgaagcaaatgctaagttcttggctaat
gataaatccccagctcgtaaagttggtcaaatcgataaccgcggttctcacttctatttg
gctacttattgggcagaggctttggctaaccaaacaaaagatgctgaattggcttctaaa
tttgctggtttagcaaaagctttaactgaacaagaagctaagatcaatgaagaattgatc
gcagcgcaaggaaaagctcaagaaatcggtggatattactatccaaacgatgaattagct
gctaaagcaatgcgtccatctgaaactttgaatgctgcaatcgcttcattgtag
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