Sphingobacterium mizutaii: 4412673_02086
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Entry
4412673_02086 CDS
T05395
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smiz
Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smiz03016
]
4412673_02086 (truB)
Enzymes [BR:
smiz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
4412673_02086 (truB)
Transfer RNA biogenesis [BR:
smiz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
4412673_02086 (truB)
Prokaryotic type
4412673_02086 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF4634
Motif
Other DBs
NCBI-ProteinID:
SNV50527
UniProt:
A0AAJ4XDA8
LinkDB
All DBs
Position
1:complement(2370454..2371176)
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AA seq
240 aa
AA seq
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MSENIEGQAKPKFAFAEGEVLLIDKPLTWTSFDVVGKLRNSIKPLKVKVGHAGTLDPLAT
GLLIVCTGKMTKQIDGFQAEDKEYTGTITLGATTPSYDLETEIDQTFDYSFLTDEDILNT
AASFVGVQDQFPPAHSAIKIGGERVYEKARRGEEVELKARRVEIMEFDVEKIELPKVYFR
IKCSKGTYIRSIAHDFGKKLNCGGHLSSLRRTKSGDFDVKNAWELTELINQVKELKNQTV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaatatagaaggacaagctaagccaaaatttgcttttgcggagggtgaagta
ttattaatcgataagccattaacctggactagttttgatgtcgttggtaaattgcgcaat
agcattaagcccttgaaggttaaagtgggccacgcaggtaccttagaccccttggcaaca
ggattgctgatcgtatgtacgggtaaaatgaccaaacaaatcgatggcttccaagcggag
gacaaagaatatactggaaccataaccttaggagctaccactccttcttatgacctagaa
actgaaattgaccaaacttttgactattcttttttgacagatgaagatatcttgaatact
gcagcatcttttgtgggcgttcaagatcagttccctcctgcccattctgctattaaaatt
ggtggagagcgagtctatgagaaagcaagacgtggcgaggaagtcgaattgaaggctaga
cgtgtagaaatcatggagtttgatgtagaaaagatcgaattgccaaaggtctatttcagg
atcaaatgcagtaaagggacttatatccgatctatagcccatgactttggtaaaaagctg
aactgcggtggacatctatcttcattgagaagaacaaaatcgggcgactttgatgtgaaa
aatgcctgggaattaactgaattaattaatcaagtaaaagagttaaagaaccaaacggtt
taa
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