KEGG   Sphingobacterium mizutaii: 4412673_02098
Entry
4412673_02098     CDS       T05395                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
smiz  Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:smiz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smiz03400]
    4412673_02098
Enzymes [BR:smiz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     4412673_02098
    5.6.2.6  RNA 3'-5' helicase
     4412673_02098
DNA repair and recombination proteins [BR:smiz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    4412673_02098
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII DEXQc_Suv3
Other DBs
NCBI-ProteinID: SNV50562
UniProt: A0AAJ4XBM1
LinkDB
Position
1:2383458..2385902
AA seq 814 aa
MSTVKNEFAEVWFFNQGWKAHEFQENCWEAISNGESGILNAPTGYGKTFAIWFGIIAQYY
AKMADPKASKKKHLHALWITPLRALSKEIHKATNQVSVDLDLDYQIELRTGDTSTSIRQK
QRKNPPQALITTPESVHLILATKSGQDYFKNLEFIVVDEWHELLGSKRGVLIELALSRLK
AINPNLKIWGISATIGNLEEAKDILLGPGTSGTLIRADIHKKMDIQTVFPDNLEKFPWAG
HLGIKLLDKVVDIINKYQTTLIFTNTRSQAEIWYQQIITHYPEFAGLLAIHHGSLSDEVR
NWVEEALHEGKLKAVVCTSSLDLGVDFRPVDCVIQVGSPKGIARFLQRAGRSGHRPDATS
IIYYVPTNSLEIIEGDSLKFAVKEKIVESRIPYLRSFDVLIQYLMTLAVGDGFYADEILQ
EVAQTHCFESITQEEFDQCMSLLIHGGSTLQAYDDFHRLVLEDGLYKVTSRKLAMRHRLS
IGAIVSDLMMRVKFLSGKYLGSIEESFISKLNIGDVFWFSGRQLELVQIIANDAIVKASE
KKKGVVPSWMGGRFAISPDLGIAIRHSFKSIHKTVGISPEIKFLKPLFKEQEQLSALPKE
DELLVEYIQSKYGYHLFFYPFEGKLVHEGMAQVVAYRLSLLKPATFSIATNEYGIELLSE
TDYEIDTALLKQIFSPQNLHKDINSGINVQEMARRRFRDIAGIAGLIFQGFPGKQMKSKH
LQANAGLFFSVFSEYEPSNLLLREAYDEVFDFQLEEGRMQLAFERISKHKIIFSRPIKLT
PFAFPIFAESFRERYSNEDWQSRLEKLKNQLLDG
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgtctacagtgaaaaatgaatttgcggaagtttggttctttaaccaaggatggaaagca
catgagttccaggaaaactgttgggaagctatttccaatggtgaatcaggaatcttaaac
gcacctaccggctatggaaaaacctttgccatctggtttgggatcattgcccagtattat
gctaaaatggctgatccgaaggcaagcaagaaaaaacatctgcatgcactgtggattacg
ccattgcgtgcgctatccaaggaaatacataaagccactaatcaggtctctgtcgatttg
gacctagattatcagatagaattgagaacaggcgatacttcaaccagtatccgccagaaa
caacgcaaaaatccgccgcaagccttaattactacccctgaaagtgtgcatctaatcctt
gcgacgaaatctggccaggattactttaagaatcttgagtttattgtggttgatgaatgg
catgagcttttggggtccaagcgtggagtattaattgagctcgcattaagtcggttaaag
gccatcaatccaaatctgaagatctgggggatttccgcgacaataggcaatctggaggaa
gctaaagatatattattaggtcctggaacatcaggaacccttatcagagcggatatccat
aagaaaatggatattcaaacggtgtttccagataatttagagaaattcccttgggcaggt
catttaggtatcaaactgttggataaggtcgtcgatatcatcaataaataccaaacgacc
ttaatcttcactaatactaggtcccaggctgaaatttggtatcagcaaatcattacccat
tatcctgagtttgcgggattattagctatccatcatggatcattgagtgatgaagtcaga
aactgggtagaagaggcgctacatgaaggtaaattaaaagctgtggtatgtaccagtagt
ttggatttaggagttgattttaggccagtagactgcgtcatccaagtgggttcgcctaaa
ggtattgcccggttcctgcaaagggcaggacgctctgggcatcgtcctgatgcgacctcc
atcatatattatgttcccaccaattcattagagatcatcgaaggcgattccttaaagttc
gctgtcaaggaaaagatcgtggaaagtcgaattccctatctgcgttcctttgatgtgttg
atccaatatttaatgactctagcggtaggtgatggcttttatgccgatgaaatattgcag
gaagtggcacaaacgcattgctttgaatcgatcacccaagaggaatttgaccaatgtatg
tcgctattaatccatggcggatccacccttcaagcttatgatgatttccatcgattggtt
ttggaagatggtttatacaaggtgacttctaggaaattggcaatgcggcatcgtttatcc
attggagccatcgtatccgacctgatgatgcgggttaagtttctttccggaaagtactta
ggctcaatagaggaatcctttatctccaaattgaacattggcgatgtattttggttttca
gggcggcaattggaattggttcagatcatagctaatgatgcaattgttaaggcttcagaa
aagaaaaaaggcgtagttccatcttggatgggtggtcgatttgccatttctccagacctc
ggaatcgctattcgccatagttttaagagtatccataaaacggtgggcatcagtccagaa
atcaagttcctaaaaccgctctttaaggagcaggaacaactttctgcccttccgaaagaa
gatgaactgttggttgaatatatacagagcaagtatggctatcacctttttttctaccca
tttgaaggcaagctggttcatgaaggaatggctcaggttgtggcttataggctgagcctg
ttaaaaccggcaactttttccattgcaaccaatgaatatggcattgaactcctttctgaa
acggattacgaaattgatactgctctcttgaagcagattttcagtccgcagaatctgcac
aaggatatcaactcgggaatcaatgttcaagaaatggcgagaagaaggtttcgggatatt
gccggaattgctgggctgatctttcaggggtttcccggaaagcagatgaaaagcaaacac
ttacaggctaatgcaggactgtttttctctgtattttctgaatatgaaccctccaatctc
ttgttgcgggaggcttatgatgaggtttttgatttccaattggaggaaggccgcatgcaa
ctcgcttttgaacgcatctcgaaacataagattatttttagcaggcctattaaattaact
ccctttgcgttccctatatttgcagaatctttccgagagcgctattccaatgaagattgg
caaagtcgactggaaaagctcaaaaatcaactattagatggctaa

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