Sphingobacterium mizutaii: 4412673_02177
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Entry
4412673_02177 CDS
T05395
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smiz
Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smiz03032
]
4412673_02177 (topA)
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_02177 (topA)
Enzymes [BR:
smiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
4412673_02177 (topA)
DNA replication proteins [BR:
smiz03032
]
Prokaryotic type
DNA Topoisomerases
4412673_02177 (topA)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
4412673_02177 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
SNV50820
UniProt:
A0AAJ4XDI7
LinkDB
All DBs
Position
1:complement(2473678..2476071)
Genome browser
AA seq
797 aa
AA seq
DB search
MAKNLLIVESPAKAKTIEGYLGKDFLVKSSYGHIRDLVKTDDAIDTEDNFKQKYEVPSDK
KALVSELKKLAKSAETVWLASDEDREGEAISWHLFETLGLKDDKTKRIVFHEITKPAILK
AIESPRKIDFNLVNAQQARRVLDRLVGFELSPVLWRKVKPSLSAGRVQSVAVRLIVERER
DINKFNAEAAFKVVAIFNTGNAKDRFKAELPQRFSTVEEANQFLNDCAKAAFQIKSLETK
PSKRTPSAPFTTSTLQQEASRKLGFSVARTMQVAQRLYEAGRITYMRTDSVNLSDTALQG
AQAEIINAYGEKYHKLRQYRTKSAGAQEAHEAIRPTYFNDHTIDGDNSEKRLYELIWKRS
IASQMSEAEFEKTTAKISISTRSEDLVATGEIMKFDGFLKVYFESSDDDNDEIDLDNSDN
AILPPLSKGQELNLEIMHATERFSRPPARFTEASLVKKLEELGIGRPSTYAPTISTIQNR
GYVVKEDRDGKERAYKVLTLNGGQVTSQTKTEITGAERNKMFPTDIGVLVNDFLVQHFKG
IVDYHFTAKVEKEFDEIAQGFKEWTDMLSNFYGPFHSEVQNTLDNADRATHERELGVDPV
TGKPISVRVGRFGPLVQIGTADDEEKPVFASLRKGQMIETITLEEALELFKLPKKVGEFE
GKEMTVAIGRFGPYIRHNSSFYSLPKGLDPLDVEQDQAIQIIEEKRQKDKDKIIKIFDEN
PEAKIENGRWGPFVRFGKQNLKIPKGVEVEKITYADVLKWAEEDSKSPSAKKAARATKAT
KTTTKKTTTKKATAKKK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttattgatagtcgagtcacccgcaaaggctaaaacaatagaaggatat
ttaggcaaagattttttagtaaaatccagttatggtcacatccgtgatttggtgaaaacc
gatgatgcgattgacacggaagacaatttcaaacagaagtatgaagttccttcggataaa
aaagctttggtcagtgagttaaagaagttggcgaaatctgcagagacagtatggttagcg
tccgatgaggaccgtgagggggaagccatttcctggcacttattcgagaccttgggtctg
aaggacgataaaactaagcgtatcgttttccatgagattaccaagccggccattttaaaa
gcgatagaatcaccaagaaagatagattttaacctggttaatgcacagcaagcacgccgc
gtattggataggttagtaggttttgaattgtctccagttttatggagaaaggtaaagcca
tcactttcagcgggtagggttcaatctgtagcggttcgattaattgttgagcgcgaaaga
gatatcaataaatttaatgcagaagcggcatttaaggtagttgccatttttaataccggc
aatgctaaagaccgtttcaaagcggaattgccgcaaaggttttcaaccgttgaggaagcg
aatcagttcctgaacgattgtgcaaaggctgcattccaaatcaagagtttagaaaccaaa
ccatctaaacgtactccatcagcaccttttacgacttcgaccttgcaacaagaggcaagt
agaaagttaggtttttcagttgcccggaccatgcaggttgctcaacgtctatatgaggct
ggacgaattacctatatgcgtaccgactcggtaaacttatctgacacggcattacaaggc
gcacaggcagagattatcaatgcctatggagagaaataccataaattacgccaataccgt
acaaagagtgccggggcacaagaggctcacgaagctattcgtcctacgtacttcaatgat
catacgattgatggcgataattcggaaaaaagattatatgagctgatctggaagcgttca
atcgcatcacagatgagtgaggctgaatttgaaaaaaccaccgctaagatctcgatttct
actaggtcagaagatttagtggcaacaggagagatcatgaaatttgatggtttcttgaaa
gtatattttgaatcttcagatgatgacaatgatgaaatcgatctggataattcagacaat
gccatccttccaccactaagtaaagggcaagagctgaatctagagatcatgcatgcgacg
gaaaggttttcgagaccaccggcaaggtttacagaagcttcattggttaagaaattggaa
gaattgggtatcggtcgtccttcaacgtatgcacctactatttcgaccattcaaaaccgt
ggatatgttgtcaaagaagaccgtgatggaaaggaaagagcttataaagtacttacctta
aatggcggacaggtgacttcacagactaaaactgaaataaccggggcggagcgcaataag
atgttccctacagatatcggtgttttggtgaatgatttcttggtacaacatttcaaagga
atcgtggattatcattttactgctaaggtagaaaaggaatttgacgagattgctcagggc
ttcaaagaatggactgatatgctttccaatttctatgggccattccattcggaagtacaa
aatacattagataatgctgatcgtgctacgcatgaacgtgaattaggtgtagatcctgta
acaggaaagccgatttcggttcgtgtaggtcgttttgggccattggttcagattggaacg
gcagatgatgaagaaaaaccagtatttgcttccctacgtaaaggacagatgattgagacc
attactttggaagaagcattggaattgttcaagctgcctaaaaaagttggagaatttgaa
gggaaagagatgacggtagctatcggtcgttttggaccatatattcgccataacagcagc
ttctattcattacctaaaggtttggatcctttggatgtagagcaagatcaagctattcag
atcattgaggagaaacgtcagaaagataaagataagatcatcaagatttttgatgaaaat
ccggaagcgaagattgaaaatggccgttggggaccttttgttcgttttggaaagcaaaac
ctcaaaatcccaaaaggtgttgaagttgagaagatcacttatgcggacgtactgaaatgg
gctgaggaagatagcaaatcgccttcggcaaaaaaagccgcacgagcaacgaaagcgact
aaaacgactactaaaaagacgactactaaaaaagctacggctaaaaagaaatag
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