Sphingobacterium mizutaii: 4412673_02725
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Entry
4412673_02725 CDS
T05395
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smiz
Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_02725 (sbcC)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
4412673_02725 (sbcC)
Archaeal homologous recombinant proteins
4412673_02725 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
HmpF
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
SNV52735
UniProt:
A0AAJ4XCR7
LinkDB
All DBs
Position
1:complement(3078769..3081810)
Genome browser
AA seq
1013 aa
AA seq
DB search
MLPLFLSIEGLYSYQEKQSIDFSELTEAGLFGIFGKVGSGKSSILEAISFALYGDTERLN
KTDKRAYNMMNLKSNQAMIVFEFLNFEKRKFRFVAQWRRRKNFDDTTPIERTAYEWIDGQ
WVPMESADGALVTNLSYPNFRRTIIIPQGQFKEFLELKGKDRSEMMKEIFYLNKFDLGPK
VGFLQAGNNRKLENLKGALSGFESISTEVLNQKKIEVEEAKKTLEVTRADFQELQQKVQS
LQEYKDKGIELQQKEAQFNDLNSKKERVQQQEAEVNRYERTSQAFKEPLNYLQSLNIERE
SLIHKIENFQVVKERQLQEIDVIEKEIASVQHDYLNLNVFRAKTEDYKRLIQIKENDKKE
KELETRLTKGTPFVERTKEAEVNLSKKLEETENRLEALKSEKIDTSQLIEMEKWYHKKDT
IEQQQKNSNKLLEQLAQEVDVEQALFNKLGYTEDNWEQMIGNELKLIENDLNKLREQETH
LQVQAKLSRFATELQSGMPCPLCGALDHPEPMVATHVQEELNKITQEKYNLDGKRTEFQK
LKEQLTRTSISLHTKRTSLDQLQKDNDGHSSNLNEHLSAFSWSGYSSEDTDAFEAQKERV
KQSEQITSGLEAEIKQMRQDLQKSRENIQKFEKELDAIKAEIAVVKGVSLHSKNSLQQVN
FEEFSEIDLDEVKRLKLHLDQRVVQIESDYLTLNQKLNTYKTKLAEIAGQYSAAKEQLSN
FNQQIKVRQEQLAKLLREYKFADITQVQHIIQRPMPVDQLRKEFQQFYVRLEVLETQINS
LKDFLKDKDFSEEELETSSKLFEFKKEELELQLSLTGGLEKELAHLTLEIGKKEKLMEEF
DQLNARGANLKVLENLFKGNGFVNYVSSIHLRQMCEMANDRFHRLTRNQLSLTINENNEF
EVIDYLNNGYRRSVKTLSGGQSFQASLCLALALAENIQSLNKSDRNFFFIDEGFGTQDSE
SINTVFDTLQYLHHENRVVGIISHVDELKERIPRSVSVEKDQEMGSKLKASWN
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgttgccattatttttaagtattgaggggttatattcctatcaagaaaaacaatctata
gatttttcagaacttacggaagcgggattatttggaatcttcggtaaggtggggtctggg
aaatcatccatattagaggctatcagttttgcgctgtacggtgataccgagcgcttgaac
aagactgataaacgagcctataatatgatgaacttaaagtctaatcaagcgatgatagtc
tttgagttcctgaactttgaaaaacgaaaattccgctttgtggcccaatggaggcgaagg
aagaattttgatgatactactccgatcgagcgtacggcctatgaatggattgatggacaa
tgggtgccgatggagtctgctgatggggcattagtaacgaatttatcctatcctaacttc
agaaggaccattatcattccgcaaggtcagtttaaggagtttttagaattgaagggtaag
gatcgttccgaaatgatgaaggagatcttttacctgaataaatttgatttgggtcctaaa
gtgggctttcttcaagcaggtaacaaccgtaagcttgaaaacctaaaaggtgccctgtct
ggttttgaaagcatttcgacagaagtcctcaatcaaaagaaaattgaggtggaagaggct
aaaaagaccttggaggttactcgagccgattttcaagagttgcagcaaaaagtccagtct
cttcaagaatacaaggacaaagggatcgagctgcagcaaaaggaagctcagttcaatgac
ctgaatagcaaaaaggagcgagttcaacagcaagaagctgaagtcaaccgctatgaaagg
acttctcaggcttttaaagagccattgaattacctgcaatcgctaaatatagaacgtgaa
tccttgatccataagattgagaattttcaggtggtgaaagagcgtcaattgcaggaaatt
gatgtgattgaaaaggagattgcttctgttcaacatgattatctgaacctaaatgtgttc
agggctaaaacagaagattataaaaggcttatccagatcaaagagaacgataagaaggaa
aaggaactggagactcgattgaccaaaggtactccctttgtggagaggaccaaagaggct
gaggtcaatctttctaagaagttggaggagactgagaacaggctggaagcattgaagtca
gagaaaattgatacttcccagctgattgaaatggagaaatggtatcataagaaggatacc
atcgagcaacaacaaaagaactccaacaaactcttggagcaattggcgcaagaggttgat
gtggagcaggctcttttcaataagttaggttataccgaggataactgggagcagatgatc
gggaatgagctgaaattgattgaaaacgatttgaataagctgcgggagcaagaaacccat
ctgcaggttcaagcgaagttgagtcgatttgctaccgaactacaatctggaatgccttgt
ccgctttgtggagcattggatcatcctgaacccatggttgcaacgcatgtgcaggaagag
ttgaataagattacccaagagaaatataatttggatggaaagcggaccgaattccaaaag
ctgaaagaacagcttacgaggaccagtatttccttgcataccaaaaggaccagtctagac
caattgcagaaagataatgatggccattctagtaatctgaatgagcatctgtcggcattt
tcatggtctggttattcatcagaggatacggatgcatttgaggcgcagaaagagcgtgtg
aagcaaagcgaacaaatcacctctggattagaggctgagatcaaacagatgcgtcaggat
ctgcagaagagtagggagaacatccaaaaatttgaaaaagaacttgatgccatcaaggct
gaaatagctgttgtgaaaggcgtaagcctgcatagcaagaattccctgcagcaagtgaac
tttgaggaattctcagaaatcgatcttgatgaggtgaaaagattgaagttgcaccttgat
caacgcgttgtgcagattgagagtgattacctgactttgaaccagaaattgaatacctat
aaaactaaattggcggagattgctggtcaatatagtgctgcgaaagaacaattgagcaat
ttcaatcagcagatcaaggtgaggcaagaacaacttgccaaattattgcgtgagtataag
tttgcagatattacgcaagtgcagcatattatccaaagaccaatgccagttgatcaattg
cgtaaggaatttcagcaattctatgtgagattagaggtcttagagacgcagatcaattcc
ttaaaagactttttgaaggataaggacttttcagaagaggagttagagaccagcagtaag
ttgtttgaatttaagaaagaagagctcgaattgcaattgtcattaacaggtggattggag
aaagaattggcgcatctgactttagaaattggtaagaaagagaagctgatggaggagttt
gatcaactgaatgctcgaggtgctaatttaaaggtgctagaaaacctatttaaaggaaat
ggttttgtgaattatgtatcgagcatccatttaaggcagatgtgtgaaatggcgaacgat
cgcttccaccgattgaccagaaaccagctgagccttactatcaatgaaaataatgaattt
gaggtaattgattatctcaataatggttataggcgttcggtgaagaccttgtcaggtggt
caaagcttccaagcatcgctatgcttggcattagccttagctgaaaacattcaatcactg
aataagtctgatagaaacttcttctttattgatgaaggcttcggtacccaagattcagaa
agtatcaatacggtgtttgataccctacaatatttacatcatgaaaatagggtggtgggt
attatttcgcatgttgatgagctgaaggaaaggattccaaggtctgtctctgtggagaag
gaccaggaaatgggttctaaactaaaagcttcgtggaattag
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