Sphingobacterium mizutaii: 4412673_03078
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Entry
4412673_03078 CDS
T05395
Symbol
gyrB_2
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
smiz
Sphingobacterium mizutaii
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smiz03032
]
4412673_03078 (gyrB_2)
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_03078 (gyrB_2)
Enzymes [BR:
smiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
4412673_03078 (gyrB_2)
DNA replication proteins [BR:
smiz03032
]
Prokaryotic type
DNA Topoisomerases
4412673_03078 (gyrB_2)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
4412673_03078 (gyrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
SNV54389
UniProt:
A0AAJ4XDF6
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Position
1:complement(3491539..3493497)
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AA seq
652 aa
AA seq
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MSEEIKNASTYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGY
CNDIVVTILKSNGISVRDNGRGIPTGINKKEKKSALELVMTVLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSIHLRAEVHREGKIFVQEYVQGKPQDDVKEIGTSDVTGTIVTFIPDSEI
FTTTTVYNYDTLANRLRELSFLNKGIKLTLIDEREILDNGEFKKNVYLSEGGLQEFVKFL
DGNRTALIPEPIYVEGIKQGVPVELALQYNDTYSENVHSYVNNINTIEGGSHVAGFRRGL
TRTLKKYADDSGLLKNLKVEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAV
DVAVGEILSSYLEENPKEAKQIVQKVVIAAQARAAARKARELVQRKTVMGGSGLPGKLAD
CSDRDPERCEIFFVEGDSAGGTAKQGRDRATQAIMPLRGKILNVEKAMEHKIYENEEIKN
MFTALGVSIGTAEDSKALNIDKLRYHKIIIMTDADVDGSHIATLLLTFYFRYMKELIERG
YVYIATPPLYLVKKGKDFEYAWTEDQRLAAIQRLKGAGKEDSVHVQRYKGLGEMNAEQLW
ETTMDPERRTLRQVTIENAAECDRIFSMLMGDEVAPRREFIEANARYAKIDI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaattaaaaatgcatctacgtattcagcggataatatccaggtattagaa
ggattagaagctgtacgtaagcgcccttccatgtacatcggtgatacaggcgtaaaaggc
ctacatcacttggtttatgaagtagtcgataactctatcgatgaagctgttgccggttat
tgtaacgacattgtcgtaaccattctaaaatctaacggtatatcggttcgcgataatggt
cgcggtattccgacaggaatcaataagaaagaaaagaaatctgctttagagcttgtaatg
actgtattgcacgccggtggtaaattcgacaaagatacctacaaggtgtccggaggtttg
cacggtgtgggggtatcctgtgtgaatgccctttccattcatttacgcgctgaagtacat
agagaaggtaaaatctttgtccaagaatatgtacaaggaaagcctcaggatgatgtaaaa
gaaatcggtaccagtgatgtcaccggaaccattgttacatttatccctgattcggaaatc
tttactactaccaccgtttataactacgatactttagcaaaccgtcttagagagctttcc
ttcttgaacaaaggcattaagttgaccttgatcgatgaaagggaaatcttggataacggc
gagttcaagaaaaatgtatacttatctgaaggtggtcttcaagaattcgtgaaattcttg
gatggaaacagaaccgctttgatccctgagccaatctatgtggaaggtatcaaacaaggg
gttcctgttgagcttgcacttcaatacaacgatacttactcagagaatgtacattcttac
gtaaataacatcaataccatcgaaggtggttctcacgttgctggtttccgtagaggatta
acccgtaccttgaagaaatacgctgacgattcgggtctattgaaaaacctaaaagtcgag
atcaccggtgatgacttccgtgaaggacttactgcggtaatctcggtaaaagttgcagaa
cctcaattcgagggacagaccaaaaccaaattgggcaactcggaagtaatgggtgccgta
gatgttgccgtaggcgagatcttgagctcttatttggaagagaacccgaaagaggctaag
caaatcgttcagaaggtagtgatagctgcccaagctcgtgctgctgcgcgtaaggcaaga
gaattggtgcaacgtaaaaccgtaatgggcggttctggtcttcctggaaaactggctgac
tgttcggatagagaccctgaaagatgtgagatcttcttcgtcgagggggattcagcgggt
ggaacagctaaacaaggccgtgaccgtgctacgcaggccatcatgcctttgcgtggtaag
atcctgaacgtggaaaaagccatggaacataagatctacgaaaatgaagagatcaagaat
atgtttaccgctttaggggtgtcgatcggtactgccgaagattccaaagcgctgaacatc
gataaacttcgttatcacaagatcatcatcatgacggatgccgacgtcgatggttcgcac
attgcaaccttgttgttgaccttctatttccgttacatgaaagaattgattgaacgtggt
tatgtctatatcgcaacgccaccattatatttggtgaagaaaggtaaagactttgaatat
gcttggaccgaagatcaacgtttggcagcaatccaacgtctgaaaggtgcaggaaaagaa
gatagcgtacatgttcaacgttataaaggtcttggagagatgaacgctgagcaattatgg
gaaaccaccatggatcctgaaagacgcacgcttcgccaagtaaccattgaaaacgctgca
gaatgtgaccgtatcttctctatgttgatgggtgatgaagttgctcctcgtagagagttt
atcgaagcgaatgcacgttacgcaaaaattgatatctaa
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