Sphingobacterium mizutaii: 4412673_03103
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Entry
4412673_03103 CDS
T05395
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
4412673_03103 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smiz01007
]
4412673_03103 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smiz03016
]
4412673_03103 (aspS)
03029 Mitochondrial biogenesis [BR:
smiz03029
]
4412673_03103 (aspS)
Enzymes [BR:
smiz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
4412673_03103 (aspS)
Amino acid related enzymes [BR:
smiz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
4412673_03103 (aspS)
Transfer RNA biogenesis [BR:
smiz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
4412673_03103 (aspS)
Prokaryotic type
Other AARSs
4412673_03103 (aspS)
Mitochondrial biogenesis [BR:
smiz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
4412673_03103 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
SNV54574
UniProt:
A0AAJ5C1G0
LinkDB
All DBs
Position
1:3516344..3518098
Genome browser
AA seq
584 aa
AA seq
DB search
MHRTHTCGELRIEDLGKTVTLSGWVQKSRDLGGMTFIDVRDRYGITQLTFNSEDNESLRS
QARELGREYVIKVTGTVIERSSKNPKIPTGDIEIKVSNLQVLNESKLPPFTIEDETDGGE
DIRMKYRYLDIRRNPVKNSLLFRHKVTQEVRNYLSALDFCEIETPYLIKSTPEGARDFIV
PSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMSF
VEQEDILNVFEGMTRHLLKTIHGIELDQFPRMTFDEAMRTYGNDKPDIRFGMKFGELNAV
AQHKDFAIFNNAELVVGIAVPGAASYTRKQIDELVDWVKRPQVGASGMVYVKCEADGTYK
SSVDKFYDQADLAQWAEATGAQAGDLILILSGPANKTRAQLSALRMELGNRMGLRKPNEF
APLWVVDFPLLEWDEETERFHAMHHPFTSPKLEDMPLLDTDPGKVRANAYDLVLNGNEIG
GGSIRIHDKDMQALMFKHLGFTPEQAQAQFGFLMNAFQYGAPPHGGLAFGLDRLTAILGG
QETIRDFIAFPKNNSGRDVMIDAPAEIAKEQLDELSISLIEPKK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaacacatacttgtggcgaattaagaattgaagacctaggaaaaaccgtaacc
ctgagcggatgggtccaaaaatcacgcgatttaggtggaatgacatttattgatgttcgt
gatagatatggtattactcagctcactttcaatagcgaagacaatgaatcccttcgtagc
caagcccgcgaattgggtagagagtatgttatcaaggtgactggtaccgtaatagaacgt
tccagcaaaaaccctaaaatccctactggagatattgaaatcaaagtcagcaacctacaa
gtgctgaacgaatccaaattacctccttttactatagaagatgaaacagacggtggtgaa
gacatccgtatgaaataccgttatttggatatccgtagaaatccagtaaagaacagctta
ttgttccgccataaggtgacgcaagaagtcagaaactacttgtctgcattagatttctgt
gaaatcgaaactccttatttaataaagtccactccagaaggtgctcgtgactttatcgtg
ccatcacgcatgaacccgggacagttttacgcacttcctcaatcacctcaaacctttaaa
caattgttaatggtgggcggaatggataaatatttccaaatcgtgaaatgtttccgtgat
gaggatttacgtgccgatagacaacctgagtttacccagattgactgcgaaatgtctttc
gtagaacaagaagatatcttgaacgtattcgaaggcatgacccgtcacctattaaagact
atccatggcattgaattagatcaattccctagaatgactttcgacgaagcgatgcgcacc
tatggtaatgacaaaccagatatccgtttcggaatgaagtttggcgaactaaacgcagta
gcacaacataaggacttcgctatcttcaacaacgctgaattagtagtaggtatcgccgtt
ccaggggctgcttcttataccaggaaacaaatcgatgaattggttgactgggttaagcgt
cctcaagtaggagcttccggaatggtctatgtgaaatgtgaagctgatggaacttataaa
tcatcagtagataaattctacgaccaagcggatcttgctcaatgggcggaggcaactggc
gcacaagctggcgacctgatcctaatcctttctggccctgccaacaaaactagagcacag
ttaagcgccttgcgtatggaattaggcaatcgcatgggcttacgtaagccaaatgaattt
gctccactttgggttgtcgacttcccattattggaatgggacgaggaaactgaaagattc
cacgccatgcaccatccattcacttctccaaagctagaggatatgcctttattggacact
gatccaggaaaggttcgcgcaaatgcttatgacttggtattgaacggaaatgaaatcggt
ggtggttccatccgtatccatgataaggacatgcaagccctgatgttcaagcacctaggc
tttactcctgaacaggcacaagctcagtttggtttcttaatgaatgcattccaatatgga
gcccctccacatggtggtttagctttcggtcttgaccgtctgactgctattttgggaggt
caggaaaccatccgtgactttatcgcattcccgaaaaacaactccggacgcgatgtcatg
atcgatgctcctgccgaaattgccaaagaacaattggacgaactaagcatcagcttaatc
gaaccgaaaaaataa
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