Sphingobacterium mizutaii: 4412673_03192
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Entry
4412673_03192 CDS
T05395
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
4412673_03192 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_03192 (priA)
Enzymes [BR:
smiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4412673_03192 (priA)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
4412673_03192 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
nSTAND3
WHD_PriA
DUF2853
Zn_ribbon_6
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
SNV55343
UniProt:
A0AAJ4XEF7
LinkDB
All DBs
Position
1:complement(3623450..3625930)
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AA seq
826 aa
AA seq
DB search
MSQLDLTAPSRVTYFVEVVLPLAIAKSYTYRVPFELNDKVAVGVRVIVQFGKNKIYSAVV
KNITTDPPQQYEAKYILDVVDNEPIVNDTQLQMWDWIAEYYMCYVGDVMQAALPAALKMA
SETKIVASDDPNLDRSSLSDKGYMILEALDLAGELTVNDVIKILGQKTVFPLLRSLFEHG
YILISEEIKQKYKAKTKAFLRLASEFNDPDGRRELLDSLNRAPKQQDAIIAFLQLIKTKN
DVSRQDIMEVSGSGAGAITALIDKGVFRVEEKVVSRFEGTDVLLSPDFSFSPAQEQAFDE
INNSFAEKEVALLHGVTASGKTQIYIRLIEAVLREGKSALYLLPEIALTAQITERLKLHF
GDQLGVYHSKFNDNERAEVWHKVNKGEFKVVIGARSSVFLPFHKLGLIIVDEEHENSYKQ
YDPAPRYHARDTAIYLAHQHQAKVLLGSATPSVESYYNAKAGKYGLIELTERFGEAKLPT
IEIVDIAEAGRKEEMYSYFSLKLLKAIEETIQKKEQVILFQNRRGHTPFLQCGTCGYVAK
CVNCDVSLTYHKTSNLMHCHYCGFSEELVQTCPACGLPNMQSKGFGTERVEEELEIQLPD
LRIGRLDLDSTKGKYGFDKVISAFDNQEFDVLIGTQMITKGLDFGNVSLIGIINADGMIN
FPDFRAYERAFSLFSQVSGRAGRRQSEGRVIIQTNTPNHRILDQVTNHDYMAMFMAEITE
RKNYQYPPFYRLIKLDVKHTDQDLVHDAAKRLASLLRQQLAERVLGPEPPLVARVRNNFI
QTITLKIERKNISISKVKELIKQALLHFELDKKNKGVRVQIDVDPY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaactggatttaacggctcctagccgtgtcacttattttgtagaggttgttttg
ccattggcgattgctaaatcctatacctatcgtgttccatttgaattgaatgataaggta
gctgtaggtgttcgggtgatcgttcagttcggcaagaacaaaatttattcagctgttgtc
aagaatatcacaactgatccccctcaacaatatgaagccaaatatatcttagatgttgta
gacaatgagcccatcgtaaatgatacccaattacagatgtgggattggatcgcagaatac
tacatgtgttatgtaggagatgtgatgcaagctgccttgccagcagctcttaaaatggca
tcagaaaccaaaatcgttgcatcggatgatccaaacctggatcgctcttcgctctcagat
aaaggctatatgattctggaagctttagatcttgcaggcgagctgaccgtgaatgatgtc
attaaaatcttaggccaaaagactgttttccccttattacgaagtctatttgaacatgga
tatatcctgatttcagaagaaatcaagcaaaaatataaggcaaaaacaaaagcctttctg
aggttggcttccgaattcaatgatccggatggtcgacgtgagttattggatagcttaaat
cgagctccaaagcaacaggatgcaatcattgctttcctccaacttatcaaaacaaagaat
gatgtcagcaggcaggatatcatggaagtatccggatccggtgctggcgccattacggcc
ttgattgacaaaggtgtctttagggttgaagaaaaggtagtcagtaggtttgaaggcacg
gatgttttgttatctccagatttcagctttagccctgcacaagaacaggcatttgatgaa
atcaataattcctttgctgagaaggaggtcgctttgcttcatggggtcaccgcttcaggg
aaaacccaaatttatatccgtctgattgaagccgttttgcgcgaaggcaaatctgctttg
tacctattgccagagattgcattgacagcacagattacggaacggttgaaattgcacttt
ggtgatcaattaggtgtgtaccactcaaaattcaatgacaatgaacgcgcagaggtttgg
cataaagtcaataaaggtgagtttaaggtagtcattggagctagatcctctgtttttctt
cctttccataagctcgggttaattattgtggatgaggagcatgaaaactcctacaaacaa
tatgatcctgcacctcgataccatgcccgcgataccgccatttacttggctcatcagcat
caagcgaaagtattgttgggctcagctaccccatcggtagagagctattataatgcgaag
gctggcaaatacggtttgattgaattgaccgaaaggtttggagaggctaaattgccaact
atcgaaattgtagatatcgccgaagcaggccgaaaggaagagatgtactcctactttagt
ttgaagctcctaaaggcaatcgaagaaaccattcagaaaaaagagcaggtcatcctgttc
cagaatagaagaggacacaccccatttttacaatgtggaacctgtggatatgtggcgaaa
tgtgtgaattgtgatgtcagcttgacctaccataagactagtaatctgatgcattgccat
tattgtggattctcagaagaactggtgcaaacctgtccagcctgtggattgcctaatatg
cagagcaaaggattcggaacagaaagggtagaagaggagttggaaatccaacttcctgat
cttcgtatcggacgccttgatctggattctacgaaaggaaaatatggctttgataaagtg
atttctgcctttgataaccaagagttcgatgttttgatcggaacgcagatgattacgaaa
gggctagattttggaaatgtgagcttgattggaatcatcaatgccgatggcatgatcaac
tttcctgattttagagcttatgaacgtgctttctctttattctcccaggtctctggtcgc
gcaggcagaaggcagtctgaaggaagagtgattattcagaccaatactccaaaccatagg
atcctcgatcaggttaccaaccatgattacatggccatgtttatggcagaaataactgag
cgaaagaattatcaatatccacctttttacagactgatcaagctggatgtcaaacatact
gatcaagatctcgtccatgacgctgcaaaaagattagcttctttacttcgacagcaatta
gcggaacgtgtcttaggtcctgaacctccattggtggcacgtgtaagaaataattttatt
caaacgattaccttaaagatcgaacggaagaatatatcgatttccaaagtaaaagaactg
atcaaacaggccttattgcattttgaattggataagaaaaacaaaggtgtccgtgtgcag
atcgatgtggatccgtattaa
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