Sphingobacterium mizutaii: 4412673_03420
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Entry
4412673_03420 CDS
T05395
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz00220
Arginine biosynthesis
smiz00240
Pyrimidine metabolism
smiz00250
Alanine, aspartate and glutamate metabolism
smiz01100
Metabolic pathways
smiz01110
Biosynthesis of secondary metabolites
smiz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
4412673_03420 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
4412673_03420 (carB)
00220 Arginine biosynthesis
4412673_03420 (carB)
Enzymes [BR:
smiz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
4412673_03420 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
GARS_A
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
SNV58447
UniProt:
A0AAJ4XF88
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All DBs
Position
1:3880106..3882925
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AA seq
939 aa
AA seq
DB search
MPRNTSINSVLIIGSGPIVIGQACEFDYSGSQAALSLKEEGISVSIINSNPATIMTDSVV
ADHVYLLPLTCESIEQILQERQIDAVLPTMGGQTALNLCIEASNRGIWDKYNIKVIGVDV
AAIEKTENREEFRQLMIDIGVGVANSKIANSFLEGKEAAQLIGFPLVIRPSYTLAGTGGG
FVHKKEEFDAALNRGLHASPTHEVLVEQAVLGWKEFELELLRDSNDNVIIICTIENFDPM
GIHTGDSITVAPGMTLSDKCYQDMRNQAIKMMRSIGNFAGGCNVQFSVNPENEEIIAIEI
NPRVSRSSALASKATGYPIAKIAAKLAIGYNLDELQNQITKNTSAYFEPTLDYVIVKVPR
FNFDKFKGANKELGLQMKAVGEVMAIGRTFIEALQKAAQSLETGRAGLGADGRQSRNLEE
IMYSLEHPSADRLFHIKDAFELGVPLESIRKATLIDKWFLLQIQELVQLEGELRRYQLNN
IPRDFFMTLKQKGYSDIQIAWLLGNTTEDEVYARRKELGIRRVYKMVDTCAAEFPAQTPY
YYSTFEDENESVASDRKKIIVLGSGPNRIGQGIEFDYSCVHGLLAAKECGYEAIMVNCNP
ETVSTDFNMADKLYFEPVFWEHVREIIELEKPVGVIVQLGGQTALKMAERLEAEGVKIIG
TNFANMDLAEDRGSFSDLLKDLDIPYPKYGVATSAEEAIKVANEVGYPVLVRPSYVLGGQ
GMSIVINDEDLEKAVVNLLKNLPGNHILIDHFLDRAEEAESDSICDGEDVHIIGMMEHIE
PAGIHSGDSSAVLPPFSLSENVQQKMEEYTIKLAKALNVIGLLNIQFAIKDENVFVIEAN
PRASRTVPFIAKAYDVPYINIATKVMLGENKLKDFTIERKLNGYAIKEPVFSFSKFPEVD
KQLGPEMKSTGEAIRFIKDLNDPHFRELYSKKSMFLNAQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaaacacctccatcaattcggtattaatcattggatctggacctattgttatc
ggacaagcctgtgagtttgactattcaggatcacaagcagcattgtctctgaaagaagaa
ggaatctctgtatccatcattaattcaaacccagctacaatcatgaccgatagtgttgta
gcagatcacgtttatttacttccattaacttgcgaaagtatcgagcagatccttcaggaa
cgccaaatcgatgctgtacttccgactatgggtggtcagaccgctttgaacctatgtatt
gaagcttcgaaccgtggtatttgggacaaatacaatattaaagtgataggagttgatgta
gctgctatcgagaaaactgaaaaccgtgaagaattccgccaattgatgatcgacatcggt
gttggtgttgcgaactctaaaatcgcaaactccttcttggaaggaaaggaagcggctcag
ttgatcggattcccattggtaattcgcccttcttacacattggctggaaccggaggtggt
tttgtgcacaagaaagaagaatttgacgctgccttgaacagaggtctgcatgcatcccct
acccatgaggtattggtggagcaagcggtattgggttggaaagaatttgaattggaatta
ttacgtgactcgaacgataacgtaatcatcatctgtacaatcgagaactttgacccaatg
ggtatccataccggagactccattaccgttgcaccgggaatgaccctttcggacaaatgt
taccaagatatgcgtaatcaagcaatcaagatgatgcgctctatcggtaacttcgccggt
ggttgtaacgttcagttctcagtaaatcctgaaaacgaagagatcattgcgatcgagatc
aacccacgtgtatcccgttcatcagcattagcttctaaagctacaggttacccaatcgct
aagatcgctgcgaaattggcaatcggatataacttggatgaattacagaaccagatcact
aaaaatacttcagcatatttcgagcctactttggactatgtaatcgtaaaggttccacgc
tttaactttgacaagttcaaaggtgctaacaaagaattgggcttacagatgaaggctgta
ggtgaggtaatggcaatcggccgtactttcatcgaagcacttcaaaaagctgctcaatcg
ctggaaactggccgtgctggtttaggtgcggatggtcgccaatctagaaacttagaggaa
atcatgtatagcttggagcatccaagtgctgatcgccttttccatatcaaagatgctttc
gaattaggtgttcctttggaatcaatccgtaaagctaccctaatcgacaaatggttctta
ttgcaaattcaagagctggttcaactagaaggtgaattgcgtagataccaattgaacaat
atcccgcgcgacttcttcatgaccttgaaacaaaaaggttattcagatatccaaatcgct
tggttattaggaaataccacggaagacgaggtgtatgcacgtcgtaaagaattgggtatc
cgtcgcgtttataaaatggtagatacttgtgctgcggaattccctgcacaaactccatat
tactactctactttcgaagatgagaacgagtctgtagcatcggatcgcaagaagatcatc
gtattaggttcgggacctaaccgtatcggtcaaggtatcgagtttgattactcctgtgta
cacggtttattggcagcaaaagaatgtggttacgaagccatcatggtgaactgtaaccct
gagactgtatcgacagactttaacatggctgacaaactatacttcgagcctgtattctgg
gaacacgttcgtgaaatcatcgaattggagaaaccagttggtgtaatagttcagttaggt
ggtcaaactgccttgaaaatggctgagcgcctagaagctgagggcgtgaagatcatcgga
acaaacttcgctaacatggacttggcagaagaccgtggaagtttttctgacttattgaaa
gatttagatattccttatccaaaatacggtgttgcaacttctgcagaagaagccatcaaa
gttgcgaatgaagttggttacccagttttggttcgcccttcgtatgtattaggtggacaa
ggaatgagcatcgtgatcaacgatgaagacttggaaaaagcagtagtgaacctattgaaa
aaccttccaggtaaccatatcctgattgaccacttcttagatagagctgaggaagcggaa
tcagattcgatctgtgacggtgaggatgttcacatcatcggtatgatggaacacatcgag
ccagcaggtatccactctggtgactcatcagcggtattgcctccatttagcttatcagaa
aatgttcagcaaaaaatggaagaatataccatcaaattagcaaaagcactgaatgtaatt
ggtctattgaacatacaattcgcaatcaaagatgagaatgtattcgtaatcgaggcaaac
cctcgtgcatctcgtacggttccatttatcgcgaaggcttatgatgtaccttacatcaat
atcgctacgaaggtgatgttgggtgagaacaaattgaaagacttcacgattgaacgtaaa
ttgaatggatacgcgattaaagagcctgtgttctctttctcgaaattccctgaggtagac
aagcaattaggccctgagatgaaatcaactggtgaagcgatccgctttatcaaagatctt
aacgatccacatttcagagaattgtacagcaagaaatcaatgttcttgaatgcgcagtag
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