Sphingobacterium mizutaii: 4412673_03909
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Entry
4412673_03909 CDS
T05395
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smiz
Sphingobacterium mizutaii
Pathway
smiz03030
DNA replication
smiz03410
Base excision repair
smiz03420
Nucleotide excision repair
smiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4412673_03909 (polA)
03410 Base excision repair
4412673_03909 (polA)
03420 Nucleotide excision repair
4412673_03909 (polA)
03440 Homologous recombination
4412673_03909 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smiz03032
]
4412673_03909 (polA)
03400 DNA repair and recombination proteins [BR:
smiz03400
]
4412673_03909 (polA)
Enzymes [BR:
smiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4412673_03909 (polA)
DNA replication proteins [BR:
smiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
4412673_03909 (polA)
DNA repair and recombination proteins [BR:
smiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
4412673_03909 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4412673_03909 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
DUF3913
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
SNV63919
UniProt:
A0AAJ5C217
LinkDB
All DBs
Position
1:4446641..4449448
Genome browser
AA seq
935 aa
AA seq
DB search
MKKLFLLDGMALIYRAYFALSKTPRITSYGLNTGAIMGFTNTLLDVLNNQKPSHIAVVFD
TAAPTNRHLEFEAYKAQREKMPEDLAASIPYIFRLIEGFNIPIITMDGFEADDIIGTLAK
KGEQMDYTVYCMTPDKDFGQLVSENIFIYKPARMGNGAETLGVAEILEKWEINNVHEVID
ILGLWGDAVDNIPGIPGIGEKTAKKLIQEFGSIENLIQNTDKLKGKLKENVENHAEQGLI
SKKLATILLDVPVEFDEKALELEKPNKEVLEPLFVELEFRTLGKRVFGDDFSMIENPNSK
AGQMDLFTVHDDANLAGSKNNLPSDTAEAPVFTNLQNTAHQYTLLDSEEKQRELALQLSK
EESFCFDTETTGLDALQAELVGISFSTKAFEGYYIPVSADQAEAQKTVDIFKGLFENENI
KKIGQNLKYDILLLSRYGVDVKGEFFDTMLAHYLIDPDTRHNMDYLSETYLNYTPVSITE
LIGTKGKNQGNMRDVDVELVKEYASEDADITLQLKNKLAPLLEETSTLDLAQKVEFPLLK
VLAEVERNGVKIDVDTLHQFSTEIERDVKVLEQQIYEKAGVTFNIASPKQLGEVLFDKLQ
LDPKAKKTKTGQYKTGEDVLLALANKSDIVQDILDFRQLQKLKSTYVDALPNLINPNTGL
IHTSYNQAVAATGRLSSTNPNLQNIPIRTERGRGVRKAFISRNENWTLLSADYSQIELRI
MAELSQDVNMLEAFKQGLDIHKATAARVYSVSLDEVNSDMRRNAKAVNFGIIYGQSAFGL
SQNLGISRKEAAEIIDQYFTQYTGIRKYMGEVIEFAKENGYVETILKRRRYLRDINSANM
TVRGFAERNAINAPIQGSAADLIKIAMINIQKDIAEKGLEGKMIMQVHDELVFDVPNHEI
DEFKAIIENRMKNAIEMQVPIEIEIGEGKNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagttatttcttttagacgggatggcattgatttaccgtgcatacttcgcactc
agtaaaacaccccgcattacatcatacggactaaatacaggagctatcatgggttttacc
aataccttgctcgatgttttaaataatcagaaacctagtcatatcgctgttgtattcgat
acagcagcacctaccaacagacatttggaatttgaggcttataaggctcaacgtgagaaa
atgcctgaggatctggctgcttctatcccttatattttccgcttaatcgaggggtttaac
atcccaatcattaccatggatggttttgaggcagatgacataattggaaccttggcaaaa
aaaggtgaacagatggactatacggtctactgtatgactccggacaaagatttcggtcaa
ttggtatctgaaaacattttcatctataaacctgcccggatgggcaatggcgctgaaaca
ttaggcgttgcggagatcttggagaaatgggaaatcaacaatgtccatgaggtgatcgat
attcttggtctttggggggatgccgtggataatatccctggtattccgggtatcggtgag
aaaaccgcgaaaaagctaatccaggaattcggatccatcgaaaacctgattcagaatacg
gataagctgaagggtaaactgaaagaaaatgtagaaaaccacgctgaacagggcttgatc
tctaaaaaacttgctacgatattgctggatgttccggttgagtttgatgaaaaagcattg
gaattggagaaacctaataaagaagttttagaacctttatttgtggagttggaattcagg
actcttgggaaaagagtttttggagatgatttcagcatgattgaaaatccaaattcgaaa
gccggacagatggacctatttacagttcatgatgatgccaacttagcgggctcaaagaat
aatctcccatcggatactgctgaagctcctgttttcactaatcttcaaaatactgcacat
cagtatacattgctggatagcgaagaaaaacaaagagaactggctctgcaattatcaaag
gaggaatctttctgttttgacacagaaacaactggtttagatgctcttcaagcagaattg
gttgggatatcatttagcacaaaggcatttgaagggtattatattccggttagtgctgat
caagcagaggctcagaaaaccgttgatatattcaaaggcttatttgaaaatgaaaacatt
aaaaaaattggccaaaacctgaagtatgacattctgcttctatctaggtatggagtggat
gtgaaaggtgagttttttgataccatgctcgctcattacctaattgatcccgatacaaga
cataacatggattacctatcggagacctacttaaactatacgccggtttctattactgaa
ttgattggtactaaaggtaaaaaccaaggtaatatgcgtgatgtggatgtggaattggtc
aaagaatacgcttctgaagatgcagacatcactttgcaattaaaaaataagcttgctcca
ttacttgaagaaacctctaccctggatttagcacaaaaagttgaattccctttattaaag
gtattggcagaagtagaaaggaatggggtaaagatcgatgtagatactttgcatcagttc
tctacagaaattgaaagggatgttaaggtattggaacaacagatttatgaaaaagctgga
gttacctttaatattgcctctccaaagcaattaggtgaagtattatttgataaacttcaa
ttggatccgaaagcgaaaaaaacaaaaactggtcaatataaaactggagaagatgtatta
ttggcattggcaaataaatccgatatcgttcaagatatcttagatttcagacagcttcaa
aagctaaaatctacatatgtcgatgcccttcctaatttgatcaatccgaatacaggttta
atccacacctcctataatcaggctgtagcggcaacaggtaggttaagttcaaccaatcct
aatttgcagaatatcccaatccgtacggaaagaggaagaggggtaagaaaagcatttatc
agtcgaaatgagaactggaccttgctttctgccgattattctcagattgagctcaggatt
atggctgaattaagtcaagatgtaaatatgttggaggcctttaaacaaggactcgatatt
cacaaggctactgctgccagggtgtactctgtatcgttggatgaagttaattctgacatg
agaaggaatgcaaaggcggtcaactttgggattatctatggacaatctgcatttggactg
tcacaaaacttggggattagccgtaaagaagctgcggaaatcattgatcagtactttacc
caatataccggtatccgcaaatatatgggcgaggtgattgaatttgccaaggaaaacggg
tatgtggaaactatattgaaaagaaggcgttatttaagagacatcaattctgcgaacatg
accgtgagaggttttgcggaacgaaatgccattaatgcccctatccaaggatcggctgca
gatttgatcaaaatcgcgatgatcaatatccaaaaggatatcgcagaaaaaggattggaa
ggcaaaatgatcatgcaggtgcatgatgaacttgtgttcgatgtccctaaccatgaaatt
gatgaatttaaagcgatcatcgaaaacaggatgaaaaacgccattgaaatgcaggttccg
attgaaatagagattggtgaagggaaaaattggttggaagcacattag
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