Sinorhizobium meliloti AK83: Sinme_0408
Help
Entry
Sinme_0408 CDS
T01521
Name
(GenBank) adhesin HecA family
KO
K15125
filamentous hemagglutinin
Organism
smk
Sinorhizobium meliloti AK83
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smk00536
]
Sinme_0408
Glycosaminoglycan binding proteins [BR:
smk00536
]
Heparan sulfate / Heparin
Microbial pathogens
Sinme_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF637
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
AEG52171
LinkDB
All DBs
Position
1:417758..423346
Genome browser
AA seq
1862 aa
AA seq
DB search
MPSLSTASTRPIPSPAAPGICRSSVATAGTIVADRTLEIVADSGGIGNSGTLIGGSARFE
TTAAFRNDGDTLTIAAAAPFINAAALVSGRDLAIYNDQILNNGGVIWANGSITLAANAAL
DPADVVQNTDGHIEALQGDLTIRANEVYNVGTAPTIGSSQIIKWLEKGSAGTTEPAEEIL
KLIDPAYLDADGNIKPSHAGAYAALWADLVSGGSLLSATSRSIVKPSVTTPSGTALAAAF
AGIWSDMLARANAAGTPDPAAAIKELVSDTAFASNGDILPQNAAAYAALWDTLASGGTSV
TDDVKAILKPTSLEIEGTGTDPATGETATVYSNRLVAAATSPWSAMTAGSGAAYDIVKIL
YQDRFQDDGVLAELVAGGSIDIKAGKVENIYGNISAAENIVITADDVKNQALGASQFLVE
VHKRPDCFTCHEGKVEFYDTFGGRIEANGTVAISGNLENITLPSSELSTKDVLDKLNAYI
AERQAAGDPDMAGVPPASDKNFELTETRTDDYTAPVAGNGSEVRKVEGTDLGSETKVDTG
PPAKFDPLSPIAVNRYGPVVVDPLAPVAVDRPAPASVALPGTPTVIPVDTAVLSEKLLPV
VPLRPSLSPTASVDALLVAGLTTLAETDPEFTQYANFVTSDYLMSEGRLAYRDDLVNNGR
ETILAALKRAGERVPVPAFDYLDKPVQVPAPDGSGSRTVYPKAVPLSLDATGALIQGRDV
AIASGSLTSSGTIAGSRSLTVSAGTVSVDSGRLIAESGALTLSALDAASFENATISGGSV
ALVTGGELLAAGTSIVSAGDLSIYGNAGVTLTGLERSFAGTWANGTFETVDQQLSTLQSG
GDLAIVSGGALTLAGVTGDAAGALSLAAAGDLVLSAVESTTAFQRSGRRSSLDISTVASS
ATKLNAGGDLSALAGGSAVLVGTALDSGGSIRLAAKDEVVLAAAQDIYSYDAKTQKKSLF
KKKSTSVSKARVTNEGVSVAAAGDVDVVAETGDFVTAGSRFVSAGGDIGLSATEGDIYAG
AYTDIFQESRTTKKSYFFGLFGSTTNSSTESRFSTGTDALAALDLTLVSGADTTLVGAHL
AAGGNLSVDTGGDFKVEAAIDSERKAFFSNNLGLVTMTTITERSFRETAKLSSFEAGGAV
DFSIGGQASLSLYHQAGVDPANPGDLYPEELLAIAGLAFIEAGLANEYFYDKQVALSPAF
KALVAVAVANFVAPAIVGTVLPGLSGWAVAAAEAFTSSFIVESLDGIVSGNYDIGEILKG
AAFSGATAGLKDAVNLSALGIDTEGLLNESLLGGFGNGQLTLGGILDGALDGAIGSGLTS
LVYGTDFGSGFSHALLSTVVNLALADVQGGIGDLGLGEGTLPSALLHGLAGCAAAEAQGG
NCAAGAAGAVAQSFFAGSLKRTTLSDQEQRDRAELIGAVAGYLLSGGDADNVNLAAAIAV
SALTNNRQLHRTEVEWINENAGAFISWMCRMKNVCDLTREQALGILAAETLDGVSDAFGV
YGGPGRRANYKDEARAFIAQSYVGPIYVDGQTMFGQLDSGSSEYRNTLLNAETALSNLAL
YDYATAQSAWPQDYTAAMSFLHEALNDFADVPTSIEAQAFVAALSSSPDRTRSIFAAYGA
SNIRAAEPTIAAAYGIKKLLAALPSESRSAAAIGFAEGTTGRTGLTPEEVENAVLNGTWG
PVADVALEEALFGDLLTRGMTVVALSSGRRVLQDPDGKQYDTVAEARQAVEAPDTGPRLT
IRGHYKHHKAMTDDLKAQLESQGYRVSKEELSFGSSCGTGRCRPDIVYQAPDGKWGIIEV
KTGDASLTFRQEEIYPQIDSGDAIPRGKVANTFGLKPGIPLKNQGYPNGIPIEIKTFPGA
EQ
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgctctcgacggcgtcaaccagacctatcccgtctccggccgctcccggcatc
tgtcgctcaagcgtcgctaccgccggcacgatcgtggccgaccggacgctggagatcgtc
gcggacagtggcggtatcggcaacagcgggacgctcatcggcggatcggcgcgcttcgag
accacggcggcgttccgcaacgacggcgataccctgacgattgcagccgccgcccccttc
atcaacgccgccgcgctcgtctccggccgcgacctcgcgatctacaacgatcagatcctg
aacaatggcggcgtcatctgggcgaacggttcgatcacacttgccgcgaacgccgcgctc
gatcccgcagatgtcgtccagaacaccgatggccacatcgaggctctccagggcgacctg
acgatccgcgcgaacgaggtctacaatgtcggcaccgcgcccacgataggctcgagccag
atcatcaaatggctcgagaaaggcagtgccgggacgaccgagccggcggaagagatcctc
aagctgatcgatcccgcctatctcgatgccgacggcaacatcaagccgtcccatgccggt
gcctatgccgcgctctgggccgacctggtgagtggcggttccttgctctccgccacaagc
cgctcgatcgtcaaaccgagcgtgacgacaccgagcggtacggcgctcgccgccgccttc
gccggcatctggtcggacatgctcgccagggcgaatgccgccggaacgcccgatccggcc
gccgcgatcaaagagctcgtcagcgacaccgccttcgcctcaaacggcgacatcctgccg
caaaacgccgcagcctatgcggcgctctgggacacgctcgcctccgggggcaccagcgtc
acggacgacgtcaaggcaatcctcaaaccgacctcgctcgagatcgaaggcaccggtacc
gatcccgcgacgggtgaaaccgcaacggtctattcgaaccggctggtggccgctgcaacc
tcgccgtggagcgcgatgaccgccgggtccggcgccgcctacgacatcgtcaagatcctc
taccaggatcgcttccaggatgacggcgtgcttgccgagttggtcgccggcggcagcatc
gacatcaaagccggcaaggtcgagaacatctacggcaatatttcggcggccgaaaacatc
gtcatcaccgccgacgacgtgaagaaccaggcgctcggcgccagccagttcctcgtcgag
gtgcataagcgcccggattgcttcacctgccacgaaggcaaggtcgagttctacgacacc
ttcggcggccgcatcgaggcgaacggcacggttgcgatctccggcaatctcgagaacatc
acgctgccttcctccgagctctccacgaaggacgtgctcgacaaactcaacgcctatatc
gccgagcggcaggctgcaggcgatccggacatggccggcgtcccgcccgccagcgacaag
aacttcgagcttacggaaacccggacagacgactatacggcgcccgtggccggcaacggc
agcgaggtccgcaaggtcgaaggcaccgatctgggatcagaaacgaaggtcgataccggc
cctcctgcgaagttcgatccgctttctccgattgccgtcaaccggtacgggccggtcgtc
gtcgatcctttggcgccggtcgcggtggacaggcccgcaccggcctccgttgcgcttccc
ggcacgccgaccgtcattcccgtcgataccgcggtgctctccgaaaagttgctgccggtc
gtgccgcttcggccctcgctctcgcccaccgcttccgtcgatgcgctcctcgtcgccggc
ctcaccacgcttgccgagaccgatccggagttcacgcaatacgccaatttcgtcacctct
gattacctgatgtccgaggggcggctcgcctaccgcgacgacctcgtcaacaacggtcgg
gagactatcctggctgccctgaagcgcgcgggtgagcgcgtgcccgtccccgctttcgat
tatctcgacaagccggtccaggtgccggcgccagacggctcgggctcgcgcaccgtctat
ccgaaggccgttccgctctcgctcgacgcgaccggcgccctgatccagggcagggacgtg
gcgatcgcctccggctcgctcaccagcagcgggacaatcgcgggaagccgcagcctgacg
gtcagcgcaggcacggtctcggtcgatagtggcagactcatcgccgaaagcggcgccttg
acactctccgccctcgacgccgcgtccttcgagaacgccacgatcagcggcggcagcgtt
gcgctggtgaccggcggcgaactcctcgcggccggcacctcgatcgtttccgcgggcgac
ctttcgatctacggaaacgccggcgtgaccttgaccgggctcgaacgcagcttcgccggc
acctgggccaacggcaccttcgagaccgtcgaccaacagctctccaccctccaatccggc
ggcgaccttgcgatcgtcagtggcggcgcgctgacgcttgccggcgtcaccggcgatgcg
gcgggcgccctcagcctggcggcggccggcgacctggtgctgtcggcggtggagtccacc
accgcgtttcaaaggagcggccgcagatccagcctcgacatctccaccgtcgccagctcg
gcgacgaagcttaacgccggcggcgacctgtcggcgcttgccggcggcagcgcggtcctc
gtcggcacggcgctcgacagcggcggctccatccgcctcgcggcgaaggacgaggtcgtg
ctcgccgcggcgcaggacatctattcctacgatgcgaagacgcagaagaagagcctcttc
aagaagaagtcgacctccgtctccaaggcccgcgtcaccaatgagggcgtctcggtcgca
gcggccggcgacgtcgacgtcgtcgccgagaccggcgatttcgtcaccgccggctcccgc
ttcgtctcggccggcggcgacatcggcctctcggcgacggaaggcgacatctacgccggt
gcctataccgacattttccaggaaagccgcacgacgaagaagagctatttcttcggcctc
ttcggctcgaccacgaactccagcaccgagagccgcttcagcaccggcaccgatgcgctc
gcagcgctcgatctgaccctcgtctccggcgccgataccacgctcgtcggggcgcatctt
gccgccggcggcaatctttcggtcgataccggcggcgacttcaaggtcgaggcggcgatc
gacagcgagcgcaaggccttcttctccaacaatctcggcctcgtcaccatgacgacgatc
accgagagaagcttccgcgagaccgccaagctctcctccttcgaggcaggcggcgcggtc
gacttctcgatcggcggccaggcgagcctcagcctctatcaccaggccggcgtcgatccg
gccaatccgggcgatctctatccggaggaactcctcgccatcgccgggctcgcctttatc
gaggccggccttgccaacgaatatttctacgacaagcaggtcgccctctcgcccgccttc
aaggccctcgtcgccgtcgcggttgccaacttcgtggcgccggccatcgtcggaacggtc
ctgccgggtctcagcggctgggccgtggccgccgccgaagccttcacttcctccttcatc
gtcgagagcctcgacggcatcgtctcgggcaactacgacatcggcgagatcctcaagggc
gccgccttctccggtgccaccgcggggctgaaggacgccgtcaatctctcggccctcggc
atcgatacggagggcctcctcaacgaaagcctgctcggcggcttcggcaacggccagctg
acgctcggcggcattctcgacggagcgctcgacggcgccatcggttccggcctgacgtcg
ctcgtctacggcaccgatttcggttccggcttctcccatgcgctgctcagcaccgtcgtc
aacctggcgctcgccgatgtccagggcggcatcggcgatctcgggctcggcgaaggcacc
ctgccgagcgcgctgctgcacgggcttgccggctgcgccgcagccgaggcacagggcggc
aattgcgcagcgggtgcggcaggcgccgtcgcgcagagcttttttgctggctctctcaag
cgtacgactctgtccgatcaggagcagcgtgatcgcgccgagctgatcggcgccgtcgcc
ggctacctgctttccggcggtgacgctgataacgtcaacctcgccgctgcgattgccgta
tccgcgctcaccaacaaccgccagcttcaccgcacggaagtcgaatggatcaacgaaaac
gcgggcgcattcatttcctggatgtgccggatgaagaacgtctgcgacctgacacgggag
caggcgctgggcatcctggcagcagaaaccctcgacggcgtctcggacgccttcggcgtg
tatggaggtcccggccgacgcgccaactataaagacgaagcccgagcattcattgcgcag
agttacgtggggccgatctatgtcgacggccaaaccatgttcggtcaactcgacagcggc
tccagtgaatatcgcaacacgcttctgaatgccgaaacggccttgtcgaacctcgcgctc
tacgactacgcgacagcgcagtcggcgtggccgcaggactacaccgccgcgatgagcttc
ctccatgaagcattgaacgacttcgcggacgtcccgacgagcatcgaagcacaagccttt
gtcgccgctctgtcgtcttcgccggatcggacgcggtcgatcttcgcggcgtatggcgcc
tcgaacatccgtgcggcagagccgacgatagcagcagcttacgggataaagaagctgctt
gccgcgttgccctcggagtcacggtcagcggcggccatcggctttgccgagggaacgacg
ggacgcacgggccttacgcccgaggaggtagagaacgccgtcctcaacggaacgtggggg
ccggtcgccgatgttgccctggaagaggcgttgttcggcgatcttttgacaagagggatg
accgtcgtcgccttgtcctcgggtcgtcgtgtgctacaagatccggacggcaagcagtac
gatacggtcgctgaggcaaggcaggcggttgaggccccagatacgggaccgcgcctgacg
atccgggggcactacaagcatcacaaggcgatgacggatgaccttaaggcgcaacttgaa
agccaaggctatcgggtttcgaaggaggagctttcgtttggaagttcctgcggtacgggg
cgctgccgtccggatatcgtctaccaagcacctgacggcaaatggggcatcatcgaggtc
aagacgggtgatgcgagcctgacgttcaggcaggaagaaatctatccgcagatcgacagc
ggcgatgccattccgagaggaaaggttgccaatacttttggccttaagccgggtattcca
ttgaaaaatcagggctatccgaacggcattccgattgagatcaagacgtttccgggggca
gagcaatga
DBGET
integrated database retrieval system
