Sinorhizobium meliloti AK83: Sinme_0987
Help
Entry
Sinme_0987 CDS
T01521
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smk
Sinorhizobium meliloti AK83
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smk03016
]
Sinme_0987
Enzymes [BR:
smk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Sinme_0987
Transfer RNA biogenesis [BR:
smk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Sinme_0987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
AEG52739
LinkDB
All DBs
Position
1:complement(996718..997869)
Genome browser
AA seq
383 aa
AA seq
DB search
MIQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDL
APFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVN
RIKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEM
AILESRETYDLHPDNAWQRLKMRVKKPIELAVLQKVAAWREREARARNVPRGRIIKDDAI
YEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEG
AAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAAEGEGADVAALKGWRRELFGMTAL
KLINGEVALRFVDKKVEAMEIDG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaacgacagcagatcttgaggccgcctgccgagagctggcccgttcaagctat
attacgatcgatacggagttcctgcgcgaaaccacgttctggccggtgctgtgcctcatt
cagatggcaagcccggaaatggcagtgatcgtcgatccgatggcacccgggatcgacctc
gccccgttcttcgcgctgatgagcaacccggatgtcgtgaaggtgttccacgccgccagg
caggacatcgagatcatccaccatctcggaaatctcattcctcatccgatcttcgatacg
caggtggccgcgatggtttgcggcttcggtgacagcgtgtcctatgaccagctcgtcaac
cgcatcaagaacgagcagatcgacaagtcgtcccgcttcaccgattggagccgcagaccg
ctcaccgacaagcagctcgactatgcgctggcggacgtgacgcatctgagggatatctac
cagtacctcaccaaggaactggatcgcgagggacgctcctcatggcttgcggaggaaatg
gcgatcctcgaaagccgggagacctacgatctccacccggacaatgcctggcagcggctg
aagatgcgggtgaagaaacccatcgagctcgccgtcctgcaaaaggtggcggcgtggcgc
gaacgcgaggcgcgggcgcgcaacgtgccgcgcgggcgaattatcaaggatgatgcgatc
tatgagatcgcgcagcagcagccgaaggatgccgaggcgctcggacgcctcaggaccatt
cccaagggttgggagcgctccagcgcggggacggccctcatcgaggccgtcggcgaagcc
cttgcgatcccgaggggcgagctgccgcgcctgccgcgccagaatcacgcacccgagggc
gctgcggcggcgagcgagctgctcaaggtgctgctgaaactcatctccgaaaaggaggga
gtcgcggccaagatcatcgccaacagcgacgatctcgacaggatcgcagccgagggcgaa
ggtgcggacgtcgccgcgctcaagggctggcggcgtgagctcttcggcatgacggcgctg
aaactcatcaacggcgaggtggcattgcgcttcgtcgacaaaaaggtcgaggcgatggaa
atcgacggttga
DBGET
integrated database retrieval system
