Sinorhizobium meliloti AK83: Sinme_1173
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Entry
Sinme_1173 CDS
T01521
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sinme_1173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smk03021
]
Sinme_1173
03400 DNA repair and recombination proteins [BR:
smk03400
]
Sinme_1173
Enzymes [BR:
smk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sinme_1173
Transcription machinery [BR:
smk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sinme_1173
DNA repair and recombination proteins [BR:
smk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sinme_1173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
AEG52924
LinkDB
All DBs
Position
1:1189297..1190307
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFASSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaattggcaggaattgatcaagccgaacaaggtggagttcgcctcctcc
ggccgcaccaaggcaacgttggtcgcggagccgcttgagcgcggctttggcctgacgctc
ggcaacgcgcttcgccgcgtcctattgtcgtcgctgcgcggtgctgccgtaaccgcggtt
cagatcgacggcgtattgcatgagttctcttctatcccgggcgtccgggaagacgtgacc
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggtcgtgcgcaagcaggggccgggcgtcgtgaccgccggtgacattcagacggttggc
gacatcgagatcctcaacccgaaccacgtgatctgcaccctcgacgagggcgcggaaatc
cgcatggagttcaccgtcaacaacggcaagggctacgtaccggctgaccgcaaccgctcg
gaagatgcgccgatcggcctcattccggtcgacagcctgtactctccggtcaagaaggtc
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactacgacaagctgacgatg
tccatcgaaaccgatggctccgtcaccggtgaagatgcgatcgctttcgcggcccgcatc
cttcaggaccagctgtcggtcttcgtcaacttcgacgagccgcagaaggaaaccgaggaa
gaggcggtcaccgaactcgccttcaaccccgcgcttctcaagaaagtcgacgaactggag
ctttccgtccgttcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctc
attcagaagaccgaagcagaaatgctccgtacgccgaattttggtcgcaagtcgctcaac
gagatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccgtcctgg
ccgccggagaacatcgaagacctcgccaagcgttacgaagaccagtactaa
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