Sinorhizobium meliloti AK83: Sinme_1452
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Entry
Sinme_1452 CDS
T01521
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sinme_1452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smk03400
]
Sinme_1452
DNA repair and recombination proteins [BR:
smk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sinme_1452
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sinme_1452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
BCA_ABC_TP_C
AAA_29
DnaJ_CXXCXGXG
AAA_25
nSTAND1
AAA_16
RsgA_GTPase
AAA_21
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AEG53197
LinkDB
All DBs
Position
1:complement(1455928..1458849)
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGV
PYSPATGLPIESQTVSQMVDRVLEFGEGTRLYMLAPLVRGRKGEYRKELAELMKKGFQRV
KVDGQFYEIADVPALDKKYKHDIDVVVDRVVVRPDIGTRLADSIETCLTLADGLAIAEFA
DRPLPPEETSAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACTT
CDGLGSQQKIDEALIVPEPNRTLRDGAIAPWAKSTSPYYNQTLEALGTVFGFKLGSRWSE
LSEEAQEAILHGTKDKITFHYQDGARSYNTTKTFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKIHALHIGEVSEMSIRAARDWFEVLPEHLSTKQNEIAVR
ILKEIRERLRFLNDVGLEYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLRHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGEVIAEGTPS
DIMSNPKSLTGKYLSGELSVAVPGERRKPKKKKEVTVVGARANNLKNVTASIPLGVFTAV
TGVSGGGKSTFLIETLYKAAARRVMGARENPAEHDRIDGFEHIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVHFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLVTLNQVGLG
YIKIGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEVLHELV
NQGNSVVVIEHNLEVIKTADWIIDFGPEGGDGGGEVIAQGTPEEVVKEPRSYTGQFLKEL
LERRPVKKVVAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcaagaccatctccattcgcggcgctcgcgagcacaatctcaagggcatc
gaccttgatctgccgcgcaacaagctgatcgtgatgaccggcctttcgggctccgggaaa
tcgtcgctcgccttcgacacgatctacgccgagggccagcggcgctatgtcgagagcctc
tcggcctatgcgcgccagttcctggaaatgatgcagaagcccgacgtcgatcagatcgac
gggctctcgccggcgatctcgatcgagcagaagaccacgtcgcgcaacccgcgttccacc
gtcggaaccgttaccgagatctacgactatctgcgcctgctcttcgcgcgcgtcggcgtg
ccctattctcccgccacaggcctgccgatcgaaagccagaccgtcagccagatggtcgac
cgggtgctggagttcggcgaggggacgcgcctctacatgctggccccgctcgtgcgcggg
cgcaagggcgagtacaggaaagagctcgccgagttgatgaagaagggcttccagcgcgta
aaggtagacgggcaattttacgagattgccgacgtgccggcgctcgacaagaagtacaag
cacgacatcgacgtggtcgtcgaccgtgtcgtggtgcggcccgatatcggaacccgtctc
gccgacagtatcgaaacctgtcttacgctcgccgacggcttggcgatcgccgaattcgcc
gaccgccccctgcctccggaagagacctccgccggcggctcggccaacaagtcgctgaac
gaaacgcatgagcgggtgctgttttccgagaagttcgcctgtcccgtctcgggtttcacc
attcccgagatcgaaccgcggcttttctcctttaacaatcccttcggagcctgcacgacc
tgcgacgggctgggcagccagcagaagatcgacgaggcgctgatcgttccggagccgaac
cgcaccctcagggacggcgccattgcaccctgggcgaaatccacgtcgccctactacaac
cagacgctcgaggccctcggcacggttttcggcttcaagctcggcagccgctggagcgag
ctttccgaggaagcacaggaagctattctccacggaacgaaggacaagatcaccttccac
tatcaggacggcgcccgatcctacaacacgacgaagacgttcgagggcatcgtgccgaat
ctcgaacgccgctggaaggagaccgacagcgcctgggcgcgcgaggagatcgagcgctat
atgtcggcggccccctgccccgcctgtgccggttaccggctgaaaccggaagcgcttgcc
gtcaagatccacgcgctgcatatcggcgaggtctccgaaatgtcgatccgcgccgcacgc
gactggttcgaggtcctgcccgagcatctcagcacgaagcagaacgagatcgccgtgcgc
atcctcaaggagatccgcgagcgcctgcgcttcctgaacgacgtcggcctcgagtatctg
agcctctcgcgcaattccggcacgctttcgggcggcgaaagccagcgcatccggctcgcg
tcgcagatcggctcagggctgacgggcgttctctatgttctcgacgagccctcgatcggc
ctgcaccagcgcgacaatgcccgcctcctggatacgctgcggcatctgcgcgatatcggc
aacacggtcatcgtggtggagcatgacgaggatgcgatcctgacggccgattatgtcgtc
gacatcggcccggcggccggcattcacggtggcgaggtcattgcggaagggaccccttcc
gatatcatgtccaatccgaagtcgttgacggggaaatatctctccggcgagctttccgtt
gccgtgcccggcgaacggcgcaaaccgaagaagaaaaaggaagtcaccgtcgtcggcgcg
cgtgccaacaatctgaagaacgtgaccgcgtcgatcccgctcggtgtcttcaccgccgtc
acgggcgtatcgggcgggggcaagtccaccttcctgatcgagacgctctacaaggctgcc
gcccgccgcgtcatgggcgcgcgcgaaaatccggccgaacacgaccgcatcgacggcttc
gagcatatcgacaaggtgatcgacatcgaccagtcgccgatcgggcgcacgccgcgctcc
aacccggcgacctataccggagccttcacgcccattcgcgactggtttgccgggttgccg
gaagcaaaggcgcgcggctaccagccgggccgcttctccttcaacgtcaagggcggccgc
tgcgaggcctgccagggcgacggcgtcatcaagatcgagatgcacttcctgccggatgtc
tacgtcacctgcgacgtctgtcacggcaagcgctacaatcgcgagacgctggacgttcac
ttcaagggcaagtcgatcgccgatgtgctcgacatgacggtggaggaaggcgtcgagttc
ttcgcggccgttccggcggtgcgcgacaagctggtgacactgaaccaggtgggcctcggc
tatatcaagatcggccagcaggcgaacacactttcaggcggcgaggcccagcgcgtcaag
ctcgccaaggagctgtcgaaacgctcaaccgggcgcacgctctatattctggacgagcca
acaaccggcttgcatttccacgatgtagccaagcttcttgaagttctgcatgagctcgtc
aatcagggtaattccgtggtggtcatcgagcacaatctcgaagtcatcaagacggccgac
tggatcatcgacttcggcccggaaggcggcgacggcggtggcgaggtcattgcgcaaggg
acgccggaagaggtcgtgaaggagccgcgctcctataccggccagttcctgaaggagctt
ctggagcgccggccggtgaagaaggtggttgcggcggagtga
DBGET
integrated database retrieval system