Sinorhizobium meliloti AK83: Sinme_3197
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Entry
Sinme_3197 CDS
T01521
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sinme_3197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smk03400
]
Sinme_3197
Enzymes [BR:
smk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Sinme_3197
DNA repair and recombination proteins [BR:
smk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Sinme_3197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEG54904
LinkDB
All DBs
Position
1:3260258..3261064
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AA seq
268 aa
AA seq
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MPLSIATWNINSVRLRMPLVEHFLKTWQPDILCLQEIKCRNDQFPSAPLRKLGYEYIEMH
GQKGYHGVATISRLPLHELSDRRDYCGVGDARHLSVVFAAGGKTIRLHNFYVPAGGDEPD
RTVNPKFGHKLDFVDEMKLLHAEAEAGVSSILVGDLNIAPLEHDVWSHKQLLKIVSHTPV
ETEGLVSVMTGGAWVDLMRRHAPPPEKLYTWWSYRAKDWTAADRGRRLDHIWSSADLASQ
LVRVEILKEARGWERPSDHVPVIAHFEL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttccattgccacatggaacatcaactccgttcgcctgcgcatgccgctggtc
gaacatttcctcaagacatggcagccggacatcctctgcctgcaggaaatcaagtgtcgg
aacgaccagttcccctccgcgccgctgaggaagctcggctacgaatatatcgagatgcac
gggcagaagggctatcacggcgtcgccaccatctctcgcctgccgcttcatgagctgtcc
gaccgccgcgactactgcggcgtcggcgatgcacgtcatctctccgtggtcttcgcggcc
ggtggaaagacgatccgcctccataatttctatgtaccggccggcggcgacgagccggac
cgcacggtcaatccgaagttcggacacaagctcgacttcgtcgacgagatgaagctcctg
cacgcggaggccgaggccggcgtctcgtcgatcctcgtcggcgatctcaacatcgcgccg
ctcgagcacgacgtctggtcgcacaagcagcttctcaagatcgtcagccatacgccggtc
gagaccgaaggcctggtttcggtgatgaccggaggcgcctgggtcgacctgatgcgccgc
cacgcgccgccgccggaaaagctctacacctggtggagctatcgggcgaaggactggacc
gccgccgaccgcggacgccgcctcgaccacatctggtcctccgccgatctcgcaagccag
ctcgtccgcgtcgagatcctcaaggaagcgcgcggctgggagcgcccgtccgaccatgtg
cctgtcatagcgcatttcgagctttga
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