Sinorhizobium meliloti AK83: Sinme_3627
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Entry
Sinme_3627 CDS
T01521
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Sinme_3627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smk03400
]
Sinme_3627
Enzymes [BR:
smk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Sinme_3627
DNA repair and recombination proteins [BR:
smk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Sinme_3627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AEG55331
LinkDB
All DBs
Position
1:3751868..3753448
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AA seq
526 aa
AA seq
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MTSFFDSESPSNVAEYSVSELSGSIKRTVEQAFEHVRVRGEISGYRGPHSSGHAYFALKD
DRARIDAVVWKTTFARLKFRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMAL
IEERKRKLAAEGLFDAGRKRPLPFMPRVVGVVTSPTGAVIRDILHRIADRFPVHVIVWPV
RVQGDGACEEIVAAIEGFNALQPGGSIPRPDVLIVARGGGSLEDLWCFNDEAMVRAAAAS
AIPLISAVGHETDWTLIDHAADQRAPTPTGAAEMAVPVKADLEAQLASLAARLKGAAARQ
MDNRRQTLRSLARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERNAAHLRP
ELLTARIVDRRQRVLDAVNRAERIVERKVQRGAQRISSADASLRVLPSRLIGQIHRASDR
VSSLGRRGDAAIAADLRRMKSALAAQDRVLQSLSYHSVLQRGFALVRDAAGEPVKQAAAV
HPGMALSLEFADGRIAAVAGEDGTAPQSPKKRPARSGEPTKQGSLF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgttctttgattccgaatctccctccaacgtcgccgaatattcggtgtcggaa
ttgtccggctcgatcaagcgcacggtcgagcaggccttcgagcatgtccgggtgcggggc
gagatttccggctaccgcggcccgcattcctcgggacacgcttatttcgccctgaaggac
gatcgcgcccgcatcgatgcggtcgtctggaagaccaccttcgcgcggctgaagttccgg
ccggaggaggggatggaggtcatcgcgaccggcagggtcacgaccttccccggctcgtcc
aaatatcagatcgtcatcgactcgcttgagccggccggtgccggggcgctgatggcgctt
atcgaggaacgcaagcgcaagcttgcggcggagggccttttcgatgcgggccgcaagcgg
ccgctgcctttcatgccgagggtcgtcggcgtcgtgacctcgccgaccggagctgtgatc
cgcgacatcctgcaccgcattgccgaccgtttcccggtacatgtcatcgtctggccggtg
cgcgtgcagggcgacggcgcctgcgaggagatcgtggcggcgatcgagggtttcaacgcg
ctgcagccgggcggctccattccccggcccgacgtgctgatcgtcgcgcgcggcggcggc
agcctcgaggatctctggtgcttcaacgacgaggcgatggtgcgcgccgcggcggcttcc
gccatccctctgatctcggccgtcggtcacgagacggactggacgctgatcgaccatgcg
gccgaccagcgggcgccgacgccgaccggtgcggccgaaatggcggtgccggtgaaggcc
gatctcgaggcccagctcgccagtctcgcagcccggctcaagggcgccgcggcgcggcag
atggacaatcgccgccagacgctgcgctcgcttgcgcgggcgctaccctcgctcgaccaa
ttgctcgccttgcctcggcgtcgcttcgacgaggcggccgccggactcggccgcggcctg
cagatgaacaccgccaacaagcggcgaagcttcgaacgcaatgcggcccatctccggccg
gagctcctgacggcaaggatcgtcgatcgccgtcagcgcgtcttggatgccgtcaaccgg
gccgagcgcatcgtcgagcgtaaggttcaacgtggcgctcagcgcatttcgtctgccgat
gcctcgctccgcgttctgccgtcgcggctgatcggccagattcatcgcgcatcggatcgc
gtttccagcctgggcaggcgtggggatgcggcgatcgccgccgatctgcgcaggatgaaa
agcgcgcttgcagcacaggaccgcgtgctgcagtcgctctcctatcacagcgtcctgcag
cgcggcttcgcgctggtgcgcgatgccgcgggcgagccggttaaacaggcggctgccgtg
catcccgggatggcgctttcgctggaattcgccgatggccgcatcgcggcggtcgccggc
gaggacggcactgcgccgcagtcgccgaagaagcggcctgcacgctccggcgagccgacg
aagcagggcagcctcttctga
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