Sinorhizobium meliloti AK83: Sinme_4339
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Entry
Sinme_4339 CDS
T01521
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sinme_4339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smk03400
]
Sinme_4339
Enzymes [BR:
smk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Sinme_4339
DNA repair and recombination proteins [BR:
smk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Sinme_4339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEG56025
LinkDB
All DBs
Position
2:complement(682515..683288)
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AA seq
257 aa
AA seq
DB search
MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA
AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNGILIASLYAPNGNPQPGPKFDY
KLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAAFRSL
VDQGWLDALRKIHPKEQLFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGIDREIR
ALEGSSDHAPVWVSMRD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgaccttcaacatcaacggcgtgaacaagcggctcgacatcctcttgacc
tggctcggtacggccgagccggacgtggtctgcctgcaggagctcaaggcgactgacgga
cagtttccgagagccgcgatcgaggcggcgggttacggtgccgtctggcggggccaggcc
gcctggaacggcgttgccattctcgcccgcgatcgtgagccggtgctcacgcgaaccggg
ttgcccggcgattcctcggatacgcagagccgctacatcgaagctgcggtgaacggcatc
ctgattgcgtcgctctatgcgcccaacggcaatccgcagcccgggccgaaattcgactac
aagctcgcctggcacctgcgcttcaaccagcatgccgccgcgctgctcgagacgggtgtg
ccggtggtgctcgccggcgactacaacgtcgttccggaaccgcgcgacatctatccgacc
cgctcctacgacgacaacgccctcgtccagccggaaagccgcgcagccttccggagcctt
gtcgatcagggctggctcgacgcactgcgcaagatccacccgaaagagcagctcttcact
ttctgggactaccgccgcaaccgctggcagcgcgacgccggccttcgcctcgaccacatt
ctcctgagccgcaagctccggcgccgcctgaccggcgccggcatcgaccgggagatccgt
gcgcttgaagggtcgagcgaccatgcgccggtatgggtgtcgatgcgggattag
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