Sinorhizobium meliloti AK83: Sinme_4960
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Entry
Sinme_4960 CDS
T01521
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk00040
Pentose and glucuronate interconversions
smk01100
Metabolic pathways
smk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Sinme_4960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sinme_4960
Enzymes [BR:
smk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Sinme_4960
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP3_bac
Motif
Other DBs
NCBI-ProteinID:
AEG56620
LinkDB
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Position
2:complement(1361805..1363253)
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AA seq
482 aa
AA seq
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MTVSYQAHDVRAFGFTIARCLILAGLVCGSWVGFSRQALAQAALAEPLSPKLPDGRQRAF
PTAEGFGAGSLGGRGGKVIYVVNTNESGQGSLRACIEASGPRICIFRTGGTIVLREGSLV
VRHPFLTIAGETAPGGGIAIRNGETQIRPSIEIVTNDVIIRHIRLRPGPHAVKACCSGGL
GMYSSSAKDIMLDHISASWGSDETIDSEDASNFTWQWGIASEPLLRGGPGKDKRARNMLF
TKGGNVSVHHSLFAFGQFRNPLIKMKIPGAVADVVNNVFFSPKWQYVLSFGDEWARIQAN
VVGNYKIAGEKLRDDHMVHLFEESGRGHAIYLKDNYDEPYRTGASEDDTLVLAEKQRRFV
STSAFDAPAVRASAPEIAYEDVLAGAGATKPRRDAVDRRITEAVRNRSGRLLVNDPQDVG
GWPELDAGVPYPDSDMDGISDDWEVESGTDPADASDGRQDLDGDGWTNLEAFLHFMAGDT
AD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaagctaccaagcgcatgacgtaagggcatttggtttcaccatagcgcgttgc
ctgattttggcggggttggtctgcggatcatgggtcggcttctcgcggcaagctctagcc
caggcggcactggccgagcctctttcacccaagcttccggacggcagacaacgcgccttt
cccacggccgaaggcttcggcgccggctctcttggaggccgggggggtaaggtgatctat
gtcgtcaacacaaacgaatcagggcagggctccttacgtgcgtgcatcgaggcatccggc
ccgcgcatttgtattttccgcacgggtggcaccattgttcttcgcgaaggatcgctggtc
gtccgacatccattcctgacgattgccggagagacggcgccgggcggcgggatcgccatc
cggaacggcgagacgcaaattcgtccttcaatcgaaatcgtgaccaatgacgtgatcatc
aggcacattcgtcttcgccccggtccgcatgccgtgaaggcttgctgttccggaggcctc
ggaatgtactccagctcggcgaaggacatcatgctcgatcatatctccgccagctgggga
tcagacgagacgatcgattcggaagacgcgagtaacttcacctggcagtggggtattgcg
agcgaaccgttgctgcggggcggccccgggaaagacaagcgtgcgcgcaacatgttgttc
acgaagggcggcaacgtctccgtgcatcactctctcttcgctttcggccagttcagaaac
ccgctgataaagatgaaaattcccggcgccgtcgccgatgtcgtgaacaacgtgtttttc
tcaccgaagtggcaatatgtcctaagcttcggcgatgaatgggcgcggatccaggctaat
gtggtcggcaactacaagatcgcgggggaaaagctgcgagacgatcatatggttcatctc
ttcgaagaaagcggacgcgggcacgcgatctatttgaaggacaattacgacgaaccatat
cgcactggcgccagcgaggatgacaccctcgttttggccgagaaacaaagaaggttcgtt
tcaacgtcggcattcgatgcaccggcggtccgcgcttctgcgcccgaaattgcttacgag
gacgtcctggcaggtgccggtgcgacgaagcctcggcgcgacgccgtcgatcgccgcatc
accgaggcggtcagaaatcgcagcggacgactgctcgtgaacgatccgcaggacgtcggc
ggttggccggaactcgatgccggggtgccgtacccggacagcgacatggacggtatctcg
gatgactgggaagtcgaaagcggcaccgatccggcagatgccagcgatgggcgacaggac
ttggatggcgacggatggacaaatctcgaagcgtttctccatttcatggcgggcgatacc
gcggattaa
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