Sinorhizobium meliloti AK83: Sinme_5187
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Entry
Sinme_5187 CDS
T01521
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase system type 1 associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smk
Sinorhizobium meliloti AK83
Pathway
smk00300
Lysine biosynthesis
smk00470
D-Amino acid metabolism
smk01100
Metabolic pathways
smk01110
Biosynthesis of secondary metabolites
smk01120
Microbial metabolism in diverse environments
smk01230
Biosynthesis of amino acids
Module
smk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sinme_5187
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sinme_5187
Enzymes [BR:
smk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sinme_5187
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
UfSP_MPN_N
Motif
Other DBs
NCBI-ProteinID:
AEG56810
LinkDB
All DBs
Position
2:complement(1585239..1586465)
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AA seq
408 aa
AA seq
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MNSHPTIALFDVVGNWLSVGGIPINRLAECVGGTPFFAYDRRLITSRVKFLRSVLPSDIH
LSYAVKANPMPAVVQHLARLVDAFDVASTTEMKTALDTPTPASHISFAGPGKTVVELTQA
VAAGVTIEIESPTEAARVVEVGSRLGIRPRVALRINPDFQIKGSGMRMGGGPQQFGIDVE
EIPSLLQKLAAAELDFLGFHVFSGSQNLHADILCEASAKHVSLLIRLAGECPWPVRYLNL
GGGFGIPYFEKDRPLDLLAIGATLSDLMECAVRPNLPDARVVIELGRYLVGESGVYVTRV
VDRKVSRGKVYLVVDGGLHHQLAASGNFGQVIRRNYPIAVANRMKETELENVSVVGCLCT
PLDMLGDNITLPRADIGDLLVVFQAGAYGLTASPTAFLGHPLPVEILA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgaactcgcatccgaccatcgcactgttcgacgttgtggggaattggctctccgtaggt
ggcattcccatcaaccggcttgcggagtgtgtcggtggcacaccgttcttcgcctatgat
cgccgactgattacatcgcgtgtcaagttccttcgctctgtcctgccctcggacattcat
ttgagctatgcggtgaaagccaatcccatgcctgcggtcgttcagcatttggctcggctg
gtcgatgccttcgacgttgcgtcgacgactgaaatgaagacggcgcttgatacgccgaca
ccggcatcgcacatcagcttcgcggggccagggaaaactgtggtcgaactcacacaggcg
gtcgccgccggcgtgactatcgagatcgaatccccaaccgaagccgcacgcgtcgtcgag
gtcggcagccggcttggaattcggccgcgcgttgctttacggatcaaccctgatttccaa
atcaaaggatccggaatgcgcatgggtggcgggccgcagcagttcggaatcgacgtcgag
gagataccgtcgctgctccaaaagcttgcagccgcagagctggactttctcggttttcat
gttttctccgggtcgcagaaccttcatgcagacatcctttgtgaggcctcggcaaagcat
gtctcactcctgattaggcttgccggagaatgtccgtggccggtccgctatctcaatctt
ggcggtgggttcgggattccgtatttcgaaaaggaccgtccactggaccttttggccatc
ggggcgactctgagtgacctgatggagtgcgcagtccgcccgaatcttcccgacgctcgc
gtcgtcatcgaactcggacgatatctggtcggtgagtctggggtctatgtcacgcgcgtc
gtcgaccgcaaggtgtcacgtggaaaagtgtatttggtcgtcgatggcggtcttcatcat
caattggccgcgtccggcaatttcggccaagtcattcgccgaaactatccgatcgctgtc
gcgaacagaatgaaggagaccgagttggagaacgtctcggtcgttggttgcctttgcaca
ccgctcgacatgctgggcgacaatatcacacttccgcgcgcagatatcggtgaccttttg
gtcgtttttcaagcaggtgcttacggtctgaccgccagcccgacagcatttctcgggcat
ccacttccggtggagattctcgcctag
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