Stenotrophomonas maltophilia K279a: Smlt0005
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Entry
Smlt0005 CDS
T00718
Symbol
gyrB
Name
(GenBank) putative DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sml
Stenotrophomonas maltophilia K279a
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sml03032
]
Smlt0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt0005 (gyrB)
Enzymes [BR:
sml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Smlt0005 (gyrB)
DNA replication proteins [BR:
sml03032
]
Prokaryotic type
DNA Topoisomerases
Smlt0005 (gyrB)
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Smlt0005 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CAQ43623
UniProt:
B2FT83
LinkDB
All DBs
Position
4911..7370
Genome browser
AA seq
819 aa
AA seq
DB search
MSDEQNTPANNGNYDANSITALEGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSIDEA
LAGHADHVAVTIHADGSVSVSDNGRGIPTGKHEQMSAKLGREVSAAEVVMTVLHAGGKFD
DNSYKVSGGLHGVGVSVVNALSQKLLVDVFQNGFHYQQEFSNGAAVTALAKLETTTKRGT
TVRFWPSTVAFHDNVEFHYDILARRLRELSFLNSGVKIVLADERGDGRRDDFHYEGGIRS
FVEHLAQLKTPLHPNVISVTGEHNGIVVDVALQWTDSYQETMYCFTNNIPQKDGGTHLAG
FRGALTRVLNNYIEQNGIAKQAKINLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSD
VRPAVENAFGARLEEFLQENPNEAKAIAGKIVDAARAREAARKARDLTRRKGALDIAGLP
GKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLSS
DQVGTLITALGTGIGRDEYNPDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIER
GYVYIGLPPLYKIKQGKQELYLKDDPALDSYLASSAVENAALVPATGEPGIEGLALEKLL
LAYAAALDSIERNAHRYDRNLLEALVDFVPMDLESLRAAGEGEGLDALAKRLNQGSLGSP
RFTLELQEANDERPAAVLVTRRHMGEQHIQVLPMSAFESGELRAIHQASKLLHGLVREGA
TISRGAKSIEVDSFAKAQNWLLEEAKRGRQIQRFKGLGEMNPEQLWDTTVNPETRRLLQV
RIEDAVAADQIFSTLMGDVVEPRRDFIEDNALKVANLDI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaacagaacaccccggcaaacaacggcaattacgacgccaacagcattacc
gccctggaaggcctggaggctgtccgcaagcgtcccggcatgtacatcggtgacgtgcat
gacggcaccggtctgcaccacatggtgttcgaggtcgtcgacaactcgatcgacgaagcg
ctggccggccacgccgaccacgttgcggtgacgatccacgccgacggttcggtctcggtg
tccgacaacggccgtggtatcccgactggcaagcacgagcagatgagtgccaagctcggt
cgcgaagtgtctgcagccgaagtcgtcatgaccgtcctgcacgcaggcggcaagttcgac
gacaacagctacaaggtttcgggcggcctgcacggcgtcggcgtcagcgtggtcaacgcg
ctgtcgcagaagctgctggtggacgtgttccagaacggcttccactaccagcaggaattc
agcaacggcgccgcagtgaccgcgctggccaagctggaaaccaccaccaagcgcggcact
accgtgcgcttctggccgtccaccgtcgccttccacgacaacgtggagttccactacgac
atcctggcccgccgcctgcgcgaactgtcgttcctgaactccggcgtcaagatcgtcctt
gccgacgagcgtggcgacggccgtcgcgatgacttccactacgagggtggcatccgcagc
ttcgtggagcatctggcccagctgaagacgccgctgcacccgaacgtcatttcagtcacc
ggcgagcacaacggcatcgtcgtggatgtggcgctgcagtggaccgactcctatcaggag
acgatgtactgcttcaccaacaacattccgcagaaggacggcggtacccacctggccggt
ttccgcggtgcgctgacccgtgtgctcaacaactacatcgagcagaacggcatcgccaag
caggccaagatcaacctgaccggcgacgacatgcgagaaggcatgatcgcggtgctgtcg
gtgaaggtgccggacccgagcttctccagccagaccaaggaaaagctggtcagctccgac
gtgcgtccggcggtggaaaacgccttcggtgcgcgcctggaagagttcctgcaggagaac
ccgaacgaagccaaggcgatcgccggcaagatcgtcgacgccgcgcgcgcacgtgaagcg
gcgcgaaaggcccgcgacctgacccgccgcaagggcgcgctggatatcgccggcctgccg
ggcaagctggccgactgccaggaaaaggatccggcgctgtccgaactgttcatcgtcgag
ggtgactcggcaggtggctcggccaagcagggccgcaaccgcaagaaccaggcggtgctg
ccgctgcgcggcaagatcctcaacgtggaacgcgcgcgcttcgaccgcatgctgtcctcc
gaccaggtcggcacgctgatcacggcgctgggcaccggcatcggccgagacgagtacaac
ccggacaagctgcgttaccacaagatcatcatcatgaccgacgccgacgtcgacggcgcc
cacatccgcaccctgctgctgacgttcttctaccgtcagatgccggagctgatcgagcgc
ggttacgtctacatcggcctgccgccgctgtacaagatcaagcagggcaagcaggagctg
tacctgaaggacgacccggcgctggacagctacctggccagcagcgcggtggaaaacgct
gcgctggtgccggccaccggcgagcccggcatcgaaggccttgcgctggagaagctgctg
ctggcctatgcagcagcgctggattcgatcgagcgcaacgcacatcgctacgaccgcaac
ctgcttgaagcgctggtcgatttcgtgccgatggacctggaaagcctgcgcgctgccggc
gaaggcgagggcctggatgcactggccaagcgcctcaaccagggcagcctgggcagcccg
cgtttcacgctggaactgcaggaggccaacgacgagcgcccggccgctgtgctggtgacc
cgtcgccacatgggcgaacagcacatccaggtgctgccgatgtcggccttcgaaagcggc
gaactgcgcgcaatccaccaggcatcgaagctgctgcacggtctggtccgcgaaggcgcg
accatttcccgcggtgccaagtcgatcgaagtcgacagctttgccaaggcacagaactgg
ctgctcgaggaggccaagcgcggccgccagatccagcgattcaagggtctgggtgaaatg
aatccggagcagctgtgggacaccacggtgaacccggaaacccgccgactgctgcaggtg
cgtatcgaggacgctgtcgcagccgaccagatcttcagcaccctgatgggcgatgtcgtc
gaaccgcgtcgcgatttcatcgaagacaacgcgctgaaggtcgcaaacctggatatctga
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integrated database retrieval system
