Stenotrophomonas maltophilia K279a: Smlt1036
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Entry
Smlt1036 CDS
T00718
Symbol
holB
Name
(GenBank) putative DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03030
DNA replication
sml03430
Mismatch repair
sml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smlt1036 (holB)
03430 Mismatch repair
Smlt1036 (holB)
03440 Homologous recombination
Smlt1036 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sml03032
]
Smlt1036 (holB)
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt1036 (holB)
Enzymes [BR:
sml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smlt1036 (holB)
DNA replication proteins [BR:
sml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Smlt1036 (holB)
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Smlt1036 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Hpr_kinase_C
AAA_5
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CAQ44597
UniProt:
B2FR95
LinkDB
All DBs
Position
1092595..1093551
Genome browser
AA seq
318 aa
AA seq
DB search
MSTFSPWQQRAFDQTVAALDAGRLGHGLLICGPAGLGKREVALALADHVLARGDAAHATR
TRQLITAGTHPDLQLVSFIPNKSGDKLRTEIVIEQVREITDKLALTPQYGVAQVVIVDPA
DAINRSAANALLKTLEEPQPGRYLWLISSDPARLPQTIRSRCQRLEFKLPPQHEALAWLQ
QQGHSEASAREALEAARGHPGQADNWLREDGLSLRREVGRDLEQLAAGKTGAVELAQKWC
GDDNAALRLRFAADLALAQASTDALTTPERLHKLAAWFDAANRTRDLLRTTVRADLAVVE
LLLAWNKVNERPAARGNR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttttcgccctggcagcagcgcgcgttcgaccagaccgtggccgcgctcgat
gccggtcgcctcggccatggcctgctgatctgcgggccggccgggctgggcaagcgtgag
gtggcgctggcattggccgaccacgtgctggcgcgcggtgatgccgcgcatgccacgcgc
acgcgccagctgatcaccgccggtacccatccggacctgcagctggtcagcttcattcca
aacaagagcggcgacaagctgcgcaccgagatcgtcatcgagcaggtgcgcgagatcacc
gacaagctggcgctgaccccgcagtacggcgtggcgcaggtggtgatcgtggacccggcc
gatgcgatcaaccgctcggcggccaacgcgctgctgaagacgctggaagagccgcagccc
ggccgctacctgtggctgatcagcagcgacccggcgcgcctgccgcagaccatccgcagc
cgttgccagcgcctggaattcaagctgccgccgcagcacgaagcgctggcctggctgcag
cagcagggccacagcgaagcatcggcgcgcgaagcgctggaggccgcccgcggccatccc
ggccaggccgacaactggctgcgcgaagacggcctgagcctgcgccgcgaagtcggtcga
gatctggaacagctggccgccggcaagaccggcgcggtggagctggcgcagaagtggtgt
ggtgacgacaacgcggcgctgcgcctgcgctttgccgccgacctggcgctggcccaggcc
agcaccgatgccttgaccacgccggagcgattgcacaagcttgcagcctggttcgatgcg
gccaaccgcacccgcgacctgctgcgcaccacggtgcgtgcagaccttgcggtggtcgag
ttgctgctggcctggaacaaggtgaacgagcggcctgccgcaaggggaaatcgatga
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