Stenotrophomonas maltophilia K279a: Smlt1277
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Entry
Smlt1277 CDS
T00718
Symbol
uvrA
Name
(GenBank) putative excision nuclease subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Smlt1277 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt1277 (uvrA)
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Smlt1277 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Smlt1277 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
AAA_21
RsgA_GTPase
nSTAND1
AAA_25
nSTAND3
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
Parb-CE
Motif
Other DBs
NCBI-ProteinID:
CAQ44827
UniProt:
B2FTD0
LinkDB
All DBs
Position
complement(1318771..1321764)
Genome browser
AA seq
997 aa
AA seq
DB search
MAMDFIRIRGARTHNLKNLDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
RCPDHGYPLEAQTVSQMVDQVLTLDPEQRYMLLAPVIRDRKGEHAQVFDQLRAQGFVRVR
VDGELHEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGDGMASVQSLD
NTGTAPTLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPGCDGLGMAEFFDPSRVVVHP
ELSLAAGAVRGWDRRNAYYFQLIASLAKHYRFDVDAAWNSLPAKVQQAVLYGSGDEAITF
TYFTEAGGRTQRKHRFEGIIPNLERRYKETESPAVREELSKYISEQPCPECHGARLNKAA
RNVFVADRPLPDLVVLPIDEALKFFSELSLPGWRGEIAAKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADYVLDIGPGAGVHGGEIVGQGTLQDILEAPRSLTGQYLSGKRAI
EIPARRHKPNPKMTLHLRGASGNNLKGVDLAIPSGLLTCVTGVSGSGKSTLINDTLFSLA
ANEINGSSHPIAPYKEIDGLDLFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEIL
YKGFNINDVLEMTVEDALKLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVTGTPEDVAACPQSYTGQFLARMLPSTSARPEQPAAVANKPDA
RPPRKVKPEKPAKVAKKAVAAKSTGKASKSTTKKKDA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctgaagaacctcgac
ctcgacctgccccgcgacaagctgatcgtgatcaccggcctgtccggctcgggcaagtcc
tcgctggcgttcgacaccatctatgcagaaggccagcgccgctatgtcgagtcgttgtcg
gcctatgcgcgccagttcctgagcgtgatggaaaagccggacctggaccacatcgaaggc
ctgtccccggccatctcgatcgagcagaagtcgacctcgcacaacccgcgttcgaccgtc
ggcacgatcaccgagatctacgactacctgcgcctgctgtacgcccgcgtcggcaccccg
cgctgcccggaccatggctacccactggaagcgcagacggtcagccagatggtcgaccag
gtgctgacgctggacccggaacagcgctacatgctgctggcgccggtcatccgcgaccgc
aagggcgagcatgcgcaggtgttcgaccagctgcgtgcgcagggcttcgtccgtgtgcgc
gtggacggcgagctgcatgaaatcgacgcggtgccgccgctggcactgcgccagaagcac
accatcgaggcggtgatcgaccgcttccgcccgcgcgaggacatcaagcagcgcctggcc
gagagcttcgagaccgcgctgaagctgggcgacggcatggcctcggtgcagagcctggac
aacaccggaaccgcgccgacgctgttctcctccaagtattcctgcccggtctgcgattac
tcgctgccggagctggaaccgcgcctgttctcgttcaacgcaccgatgggcgcctgcccc
ggctgcgatggcctgggcatggccgagttcttcgacccctcgcgcgtggtggtgcatccc
gaactgtcgctggccgccggtgcggtgcgcggctgggatcgccgcaatgcctactacttc
cagctgatcgcttcgctggccaagcactaccggttcgacgtcgacgcggcatggaactcg
ctgccggccaaggtgcagcaggccgtgctgtacggcagcggcgacgaagcgatcaccttc
acctacttcaccgaagccggtggccgcacccagcgcaagcaccgcttcgagggcatcatt
cccaacctcgaacgccgctacaaggaaaccgagtcgccggcggtgcgcgaagaactgtcc
aagtacatcagcgagcagccgtgcccggaatgccacggcgcgcgcctgaacaaggcggct
cgcaacgtgttcgtggccgaccgcccgctgccggacctggtggtgctgccgatcgacgag
gcgctgaagttcttcagcgaactgagcctgccgggctggcgtggcgaaatcgccgcgaag
atcgtcaaggaaatcggcgaacgcctcggcttcctggtcgatgtgggcctggattacctg
accctggagcgcaaggccgacaccctgtccggtggcgaggcgcagcgcatccgcctggcc
agccagatcggcgccggcctggtcggcgtgatgtacgtgctcgacgagccgtccatcggc
ctgcaccagcgcgacaacgaacgcctgctcggcaccctcacccgcctgcgcgacctgggc
aacacggtgatcgtggtggagcatgacgaggatgcgatccgcctggccgactacgtgctg
gacatcggcccgggcgcgggcgtgcacggcggcgagatcgtcggccagggcaccctgcag
gacatcctggaagccccgcgctcgctgaccggccagtacctgtccggcaagcgcgcgatc
gagattccggcgcgccggcacaagccgaatccgaagatgaccctgcacctgcgcggggcc
agcggcaacaacctgaagggcgtggacctggcgattccgtcgggcctgctgacctgcgtg
accggcgtgtccggctcgggcaagtcgaccctgatcaacgacaccctgttctcgctggcc
gccaacgagatcaacggttcctcgcacccgatcgccccgtacaaggagatcgatggcctg
gacctgttcgacaaggtggtggacatcgaccagtcgccgatcggccgcaccccgcgttcc
aacccggccacttacaccggcctgttcactccactgcgcgaactgttcgcacaggtgcct
gaagcgcgcgcgcgtggctattcgccgggccgcttcagcttcaacgtgcgcggcggccgc
tgcgaagcctgccagggcgacggcctgatcaaggtcgagatgcacttcctgccggacgtg
tacgtgccgtgcgatgtctgccatggcaagcgctacaaccgcgaaacgctggagatcctg
tacaagggcttcaacatcaacgacgtgctggaaatgaccgtcgaggatgcgctgaagctg
ttcgagccggtgccgtcgatcgcgcgcaagctggaaacgctggtcgacgtcggcctgagc
tacatcaagctgggccagagcgcgaccacgctgtctggtggtgaagcgcagcgcgtgaag
ctgtccaaggaactgtcgcgccgcgataccggccgcaccctgtacatcctcgacgagccg
accaccggcctgcacttccacgacatcgaagcgctgctgggcgtgctgcacaagctgcgc
gacgagggcaacacggtggtggtgatcgagcacaacctggacgtgatcaagaccgccgac
tggatcgtcgatctgggcccggaaggcgggcatcgcggtggcaccatcctggtcaccggc
acgccggaagacgtggcggcctgcccgcagtcgtacaccggccagttcctggcccgcatg
ctgccgtccaccagcgcgcgcccggaacagccagccgccgtggccaacaagcccgatgcc
cgcccgccgcgcaaggtgaagcctgagaagccggccaaggtggcgaagaaggcggtggct
gccaagagcaccggcaaggccagcaagagcacgaccaagaagaaggacgcctga
DBGET
integrated database retrieval system
