Stenotrophomonas maltophilia K279a: Smlt1736
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Entry
Smlt1736 CDS
T00718
Symbol
hfq
Name
(GenBank) putative phage-related protein (host factor-I protein)
KO
K03666
host factor-I protein
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml02024
Quorum sensing
sml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smlt1736 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smlt1736 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sml03019
]
Smlt1736 (hfq)
03036 Chromosome and associated proteins [BR:
sml03036
]
Smlt1736 (hfq)
Messenger RNA biogenesis [BR:
sml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Smlt1736 (hfq)
Chromosome and associated proteins [BR:
sml03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Smlt1736 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CAQ45259
UniProt:
B2FL26
LinkDB
All DBs
Position
1778595..1778870
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AA seq
91 aa
AA seq
DB search
MSKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVKVGPGGGYVQSGEGGQAGDEADE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggggcaatcgctgcaggatcctttcttgaacgcactgcggcgcgaacgcgtg
ccggtttcggtgtacctggtcaacggcatcaagctgcagggcacgatcgagtcgttcgac
cagttcgtggtcctgctgcgcaacacggtcagtcagatggtctacaagcacgccatttcc
acggtcgttccggcacgcaacgtgaaggtcggtccgggcggtggttacgtgcagtcgggt
gaaggtggtcaggcaggtgatgaagcagacgagtaa
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