Stenotrophomonas maltophilia K279a: Smlt2223
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Entry
Smlt2223 CDS
T00718
Symbol
recJ
Name
(GenBank) putative single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml03410
Base excision repair
sml03430
Mismatch repair
sml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Smlt2223 (recJ)
03430 Mismatch repair
Smlt2223 (recJ)
03440 Homologous recombination
Smlt2223 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sml03400
]
Smlt2223 (recJ)
DNA repair and recombination proteins [BR:
sml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Smlt2223 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Smlt2223 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Smlt2223 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAQ45721
UniProt:
B2FQ76
LinkDB
All DBs
Position
2250037..2251800
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AA seq
587 aa
AA seq
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MPMSLAADAAQPSSDTPMIRRRDAVVPGSWPDGTLPLLARLYASRGAGTPELALPKLGSL
HAPELLTGIDDAVGLLIEAIANDKRILVVGDFDCDGATACAVGVRGLRMLGAQHVFHAVP
NRMVHGYGLSPSLVEELAALQPDLLVTVDHGIACHAGVIAAKARGWQVLVTDHHLPGPQL
PPADVIVDPNLDGDAFPSKSLAGVGVIFYVLMALRRHMREAGVFADGKGPDLTTLLDLVA
VGTVADLVALDPNNRALVSAGLRRLRAGQGCVGLRALIEASGRDAARLTATDIGFALGPR
LNAAGRLEDMALGIALLLTEDPRQAREIAQTLEQINSERRAVQQSMTDDAEQALTRVVLD
MAGQRPVAACLFDADWHPGVVGLVASKMKDRLHRPVIAFAPAEPGADTLRGSARSIPGLH
IRDALALVDARHPGLIERFGGHAMAAGLSMRLDHVDDFKAAFVAVVLEMLDPAALQQQVL
SDGELAADELDHRHADALRLAGPWGQGFPEPLFDGHFEVANWRVLKERHLKLELRLPGVP
GTINAIHFGGWHGNAPGRHVHLAYRLACDDYRGGSAIQLIIEHCLPA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgtcccttgccgccgatgctgcgcagccgtcctctgatacgccgatgatccgc
cgccgcgatgcggtcgtacccggcagctggccagacggcacgctgccactgctggcgcga
ctctatgccagccgcggcgccggtacgccagagctggcactgccgaagctgggcagcctc
cacgcgccggagctgctgaccggcatcgatgatgcggtgggtctgctgatcgaggccatc
gccaacgacaagcgcatcctggtggtcggcgatttcgattgcgatggcgccaccgcctgt
gcggtcggcgtgcgtggcctgcgcatgctcggcgcgcaacacgtcttccacgcggtgccg
aaccgcatggtgcacggctacggcctgtcaccttctctggtggaggagctggccgcgctg
cagccggacctgctggtcacggtcgaccacggcatcgcctgccatgcgggcgtgatcgcg
gccaaggcgcggggctggcaggtgctggtcaccgaccatcaccttcccgggccgcagctg
ccgccggccgatgtcatcgtcgatcccaatctcgacggtgatgcgttccccagcaagtcg
ctggccggcgtcggtgtgatcttctacgtgctgatggcgctgcgccgtcacatgcgcgag
gccggcgtcttcgccgatggcaaggggccggacctgaccacgctgctggacctggtggcg
gtcggcaccgtcgccgacctggtggcgctggatccgaacaaccgggcactggtcagcgcg
ggcctgcgccgtctgcgcgcggggcagggctgcgtcggcctgcgagcgctgatcgaagcc
agcggccgtgacgcggcgcggctgaccgccaccgacatcggcttcgcactcggcccacgc
ctgaacgcggcgggccggctggaagacatggcgctgggcatcgcgctgttgctgaccgaa
gacccgcgccaggcgcgggagatcgcgcagacgctggagcagatcaactcggaacggcgc
gccgtccagcagtcgatgactgacgacgccgagcaggccttgacccgcgtggtgctggac
atggccggtcagcgaccggtcgcggcctgcctgttcgatgccgactggcatcccggtgtg
gtcggcctggtcgcatcgaaaatgaaggatcgcctgcaccgtccggtgatcgcctttgcc
ccggccgaacccggcgccgacaccctgcgcggctcggcgcgctccattcccggcctgcac
atccgtgacgcgctggcgttggtcgatgcgcgccatccgggcctgatcgagcgcttcggt
gggcatgccatggcggctgggctgagcatgcggctggatcacgtcgatgacttcaaggcc
gccttcgtcgccgtggtgctggagatgctcgatccggccgcattgcagcagcaggtgctc
agtgacggcgaactggcggcagatgagctggaccatcgccacgccgatgcgctgcgcctg
gccgggccgtggggccagggtttccccgagccactgttcgacggccacttcgaagtggcc
aactggcgcgttctgaaggaacgccacctcaagctggagctgcgcctgcccggcgtgccc
ggcaccatcaacgcgatccacttcggtggctggcacggcaatgcgcctggccgccacgtg
cacctcgcctaccgcctggcctgcgatgactaccgtggcggcagtgccatccagctgatc
atcgaacactgcctgcccgcctag
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