Stenotrophomonas maltophilia K279a: Smlt2848
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Entry
Smlt2848 CDS
T00718
Name
(GenBank) putative RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sml
Stenotrophomonas maltophilia K279a
Pathway
sml02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Smlt2848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sml03021
]
Smlt2848
Transcription machinery [BR:
sml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Smlt2848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
GerE
HTH_11
HTH_28
CDT1_C
Motif
Other DBs
NCBI-ProteinID:
CAQ46309
UniProt:
B2FHT2
LinkDB
All DBs
Position
2887398..2887922
Genome browser
AA seq
174 aa
AA seq
DB search
MPMAVPAASSTALAGFYREHHGWLLGWLRRRTHNADCAADLTQDTFLRLLSRRVDPSELR
LPRAYLSTIAHALLVNHWQRADLERAYLTALAAQPEPVHPSAEERTQALQLLHAIADMLS
GLAERPRRAFLLARLSGLGYAEIGQQLGVSERMVKKYMAQAMLHCLCLSGDAAA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggccgtgcccgccgcctccagcaccgcgctggcggggttctaccgcgaacac
catggctggctgctgggctggctgcgccgccgcacccacaacgccgactgcgccgccgac
ctgacccaggacaccttcctgcgcctgctcagccggcgcgtcgatccgtccgaactgcgc
ctgccgcgcgcctatctcagcaccatcgcgcacgcgctgctggtcaaccactggcagcgc
gcggacctggagcgcgcctatctgaccgcgctggccgcacaaccggagccggtgcatccc
tctgcggaggagcgcacgcaggcgctgcagctgctgcatgccatcgctgacatgctgtcc
ggcctggccgagcggccacggcgtgccttcctgctggcccggctgtccggactgggctat
gcggagatcggccaacagctgggcgtgtccgagcgcatggtcaagaagtacatggcgcag
gcgatgctgcattgcctgtgcctgtccggcgacgcggcggcatga
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integrated database retrieval system
