Stenotrophomonas maltophilia K279a: Smlt3338
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Entry
Smlt3338 CDS
T00718
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sml
Stenotrophomonas maltophilia K279a
Brite
KEGG Orthology (KO) [BR:
sml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sml03016
]
Smlt3338 (rnd)
Enzymes [BR:
sml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Smlt3338 (rnd)
Transfer RNA biogenesis [BR:
sml03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Smlt3338 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAQ46772
UniProt:
B2FN45
LinkDB
All DBs
Position
3385313..3386392
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AA seq
359 aa
AA seq
DB search
MATWITTPAELDAYFQQRPTRIGLDTEFIRERTFWPQLALVQMAVGQDILLIDPLIPGMT
EALAHWLADESITKVMHSASEDLVAFRWACGVLPRPLFDTQIGASLAGIGGGMGYQKLVA
EITGVALAKGETRSDWMRRPLSESQLQYAADDVEHLFALHDAIDARLQALGRQQWLHDDG
ERLLASVANDEDRWPHLAMRSAQFLDAAAQHRLLRLLRWRDVQARSSDRPRSWILDNELA
ATLARTPPADEAALGKLFEQFPKAPRKLAGAVWQALSTPLADEADAPLALPANDSNKQAL
KKLQDAVAERSRELGLPDGILASRKHLESYLERRQWPAALAGWRQQELESRLQALLPAR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacctggatcaccacccccgccgagctggatgcgtacttccagcagcgcccgacc
cgcatcggcctggacaccgaattcatccgtgaacgcaccttctggccgcagctggccctg
gtgcagatggcggtcgggcaggacatcctgctcatcgacccgctgattcccggcatgacc
gaggcgcttgcgcattggctggccgatgaatccatcaccaaggtaatgcacagcgccagc
gaagacctggttgccttcaggtgggcctgcggcgtgctgccgcgaccgctgttcgacacc
cagatcggggcatcgctggccggcatcggcggcggcatgggctaccagaagctggtggcg
gagatcaccggagtggcactggccaagggcgagacccgctcggactggatgcgccgcccg
ctgtccgaatcgcagctgcagtacgccgccgacgatgtcgagcacctgttcgcactgcac
gacgccattgatgccaggctgcaggcgttgggccgccagcagtggttgcacgacgatggc
gagcgcctgctggccagcgtcgccaacgatgaagatcgctggccgcacctggcgatgcgc
tcggcacagttccttgatgccgccgcgcagcaccgcctgttgcgcctgctgcgctggcgt
gatgtgcaggcacgcagcagcgaccgcccgcgaagctggatcctggacaacgaactggcc
gccactctggcgcgcacgcctccggccgacgaggcagcgctgggcaagctgttcgagcag
ttcccaaaggcaccgcgcaagctggccggcgccgtgtggcaggcgctgtccacgccgctg
gccgacgaagccgacgcgccgctggcgctgccggccaacgacagcaacaagcaggcgctg
aagaagctgcaggatgccgtggccgaacgcagccgcgagctgggactgccagatggcatc
cttgcctcgcgcaagcacctggaaagctatctggaacgtcgccaatggcccgccgcactg
gccggctggcgccagcaggaactggaatcgcgactgcaggcactgttgccggcgcgctga
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